Trifolium pratense (red clover): 123913961
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Entry
123913961 CDS
T08949
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123913961
Spliceosome [BR:
tpra03041
]
Common components
Common spliceosomal components
General mRNP proteins
123913961
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
123913961
NCBI-ProteinID:
XP_045820860
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All DBs
Position
LG3:34003792..34012018
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AA seq
584 aa
AA seq
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MDFDEYDYLEKTVEEQQEDRDSSKKKRESSDKTEKSYRKRDEIEDGTEEKRSKRSSGGDD
EHVSRKDRDRDDDRDKERHRSGRDRDRDRDRESERSSRDRDRDREKDRDRERDRDRRDKD
KERERRDREREKEKERERERSRRSKSRSERDREIEREEKERSRRSISRSERERDREREER
ERSRRSRSRSERDLDRDSRRFRDKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFS
KAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNL
VQSNTTSGAAGVTGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGH
CKGFGFIQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVADHVGSQDTTAKSADFDDDEGGL
ALNAQSRALLMQKLDRSGIAASIGLPINGSAPAPQAFSLPISNPGLIPALGLPNQIMPTQ
VAEPVGTPSNCLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNSAGFVY
LMFETVEAASAAQRAMHMRWFARKMISAIYMQPQVYEAKFKGEV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgattacttggagaagacagtggaggaacaacaagaagacaga
gattcttctaagaagaagagagaaagtagcgacaaaaccgaaaagagttacagaaagcgc
gatgagatcgaagatggaaccgaagagaagcggagcaagaggtccagcggcggcgatgac
gagcatgtttccaggaaggatagagatcgtgatgatgaccgcgataaggagcgtcatagg
agtggcagagatagggatagggatagagatagagagagtgagaggagtagcagagataga
gacagagatagggagaaggatagggacagagagagagatagggataggagagataaggac
aaagagagggagaggagggatagggagagggagaaggagaaggaaagggagagagaaagg
tcccggaggagtaagagtcgttctgagagagatagagagatagaacgagaggagaaagag
aggtctcggagaagcataagtcgttctgaacgagaaagggatcgagaacgggaggagaga
gagaggtccaggaggagcagaagtcgttctgagcgcgatttggatagagatagccggaga
tttagggacaagaaagaagcagcggagcctgaggcagatccagaaagggatcaaagaact
gtttttgcctatcagatgcccttaaaggcaacagaaagggatgtttatgaattcttctca
aaagctggcaaggtgagagatgttcgtctgataatggacaggaactcaagacgatctaaa
ggagtggggtatattgaattttatgatgcaatgtcggtgccaatggcaattgctctctcc
ggccaacttcttcttggacaacctgtaatggtcaaaccttctgaggctgaaaagaaccta
gttcaatctaatactactagtggagctgctggtgtgacaggaccatatggagctgtggac
agaaaactttatgtggggaaccttcacttcaatatgactgagagccagttgagggagatt
tttgagccatttggtactgtggaggttgtgcaactgcctcttgaccttgagacaggacat
tgcaagggttttgggtttattcaatttgcccatctagagcatgccaaggctgcccagagt
ttaaatggaaaattggaaattgctggccgaactatcaaggtttcatctgtagcagaccat
gttggaagccaagatacaacagcaaaatctgcagactttgatgatgatgaaggtggactg
gctttaaatgcccaatcaagagcattgcttatgcagaagctggatcgctctggaattgct
gcaagcattggtttacctataaatgggtcagctcctgctccacaagcatttagtttgcct
attagtaatcctggattaataccagcactaggtctaccaaatcaaattatgcctacccaa
gttgccgaacctgtcggaacccccagcaactgtttactgttgaagaatatgtttgatcca
accactgagacagagccagattttgatctagacattaaagaagatgtagaagaagagtgt
tctaaatatgggcgggtgaagcatatctatgttgacaaaaacagtgctggttttgtgtat
ttgatgtttgaaacggtggaagcagcaagtgctgctcagcgtgcaatgcacatgaggtgg
tttgcacgcaaaatgatttcagctatatacatgcaacctcaggtatatgaagccaagttt
aaaggggaagtttga
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