Trifolium pratense (red clover): 123914007
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Entry
123914007 CDS
T08949
Name
(RefSeq) DNA topoisomerase 2 isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpra03032
]
123914007
03036 Chromosome and associated proteins [BR:
tpra03036
]
123914007
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
123914007
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Topoisomerases
123914007
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
123914007
Centrosome formation proteins
Centriole proteins
123914007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
123914007
NCBI-ProteinID:
XP_045820925
LinkDB
All DBs
Position
LG3:complement(50737290..50745737)
Genome browser
AA seq
1492 aa
AA seq
DB search
MEKRPLQTSNAANIPSKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLWVYENDEMVN
RSISYVPGLYKIFDEILVNAADNKQRDPSMDSLKVTIDPEANTVSVYNNGDGVPVEIHQE
EKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGRRLKKYKQ
VFSNNMGKKSEPVITKCKASENWTKVTFKPDLEKFKMTYLEEDVVALMKKRVLDMAGCLG
KTVKVELNGTLIRFKSFRDYADLFLKSAEKSKPMPLPRIHAKVGDRWEICVSLSEGQFQQ
VSFVNSIATIKGGTHVDYITNQITAHVMNKVNKKKKDANVKAHTVKNHLWVFVNALIDNP
AFDSQTKETLTTRQASFGSKCDVPESMLKDVEKSGIVDTLLSWADFKQSKDLKKTDGTKT
QRIRGIVKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLN
VREASSKQIMENEEIQNIKKILGLQQNKEYTNVKSLRYGHLMIMADQDHDGSHIKGLLIN
FIHSFWPSLLKVPSFMVEFTTPIIRATHSNGTKLSFYSMPEYEAWKETLGNASGWQIKYY
KGLGTSTPQEGREYFRDLDKHKKDFVWDDELDGNAIELAFSKKKAEDRKIWIRNFEPGTC
RDHEAKLINYKDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKKKLVKEIKVG
QFIGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLKPNGQFGTRNLGGKDHASSRY
IYTELNTVTRSLFHEDDDKLLEYLNEDGRSIEPTWYIPIIPLVLVNGSEGIGTGWSSYIP
NYNPREISANVRRLLNGEEMVPMDPWYRGFRGTIEKSAKEGGYIVNGSVVEIDEQTFRIT
ELPVRKWTQDYKQFLESITDGTPNVKDPLIEDFRQNGDDEIVDIEVKMKADKIATIMQEG
LFKKFKLTGTISTSNMHLFDAEGNIKKFDNPEQILEEFYPLRLEYYEKRKKYILGNLERL
LLILDNKVRFILGVVNGEIIVSNRKKAELLKELKQKGFTPMPRKGKSSEPQVAGANDDNS
EEREDGEQETGTVRVEEATWGDYEYLLSLSIGTLTLESVQKLLDEKAEKEKEFEILMGTP
SKSLWLKDLDEFEKKLDELDSKDAEAGRKRSSQAKKNNGFVSKPAKKPPQPRKNTKKTQN
VEPDNDNSPMEIENAVGKKPPQPRKNTKKTQNVEPENDNSSMEVENAVDIAKPKGRAGSK
KNTPKEPDEEMLSLQERLAAYNIESSGEKSQAMESEEPVPAMKKQINRGGGAKKKSSTIV
LDSDNEVNDVDDDDDFEVHEKAAPVKKGGRKPAAQNAKKAPAKAPAAPKKRNVGTKQLSG
QKILTDMLQPAESPEKKVRKMRESPFNKKSGSILGRDANKDISPLADLSEGSTSNSPIAE
EEVVEIPPQPSRARPQRANRTQKKYVVSESEPEIDDDSDDDAELSDFEEDDD
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgacctctccaaaccagcaacgccgcgaacattccttcgaaaacaatcgaa
gaaatgtaccaaaagaaaacacagctcgaacacattctcctccgtcctgatacctacgta
ggttcaattgaaaaacacactcaaaatctatgggtttacgaaaacgacgaaatggttaac
cgttcaatttcatacgttcctggactttacaagatcttcgatgagattcttgttaacgct
gccgataacaaacagcgagatccgtccatggattcactcaaagttacgatcgatccggaa
gcaaataccgtttctgtttataataacggtgacggtgttccggttgagattcatcaagaa
gagaaggtttatgttcctgagttgatttttggtcatcttcttactagtagtaactatgat
gataatgtgaagaaaactactggtggacgtaacggttatggtgctaagctcacgaatatt
ttctcgactgagtttatcattgagactgctgatggacgtcgtctgaagaagtataagcag
gtgttctcaaacaatatggggaagaagtccgaaccagtcataaccaaatgcaaagctagt
gagaactggacaaaggtgacctttaagcctgacttggagaagttcaaaatgacctatctt
gaagaggacgttgttgctttgatgaaaaagcgtgtgctggacatggcagggtgccttgga
aagactgttaaagttgaactcaatggcaccttgattcgttttaagtcgttccgtgattat
gctgatctcttcctgaaatctgcggagaagtccaaacccatgcccctgccaaggattcat
gccaaagtaggtgataggtgggagatttgcgtgagtctaagtgaggggcaatttcaacag
gtcagctttgttaactccattgctacaatcaagggtgggactcacgttgattacatcacc
aatcagattaccgcccatgtaatgaataaagtaaataagaaaaagaaggatgccaatgtg
aaagctcacactgtgaagaatcatttgtgggttttcgtcaatgctcttattgacaaccct
gcttttgattctcaaactaaggagactctcactacaagacaagctagttttggttctaaa
tgtgatgttccagaatcaatgctgaaggatgttgaaaaatctggaatagtggacaccctc
ctatcatgggcagattttaaacaaagtaaagatttgaagaaaactgatggaactaagacc
cagaggatccgtgggattgtaaagcttgaggatgccaatgatgctggtggaaggaactct
gaaaagtgtaccttgatattgacagagggagattctgctaaggcccttgcgatggctggg
ctctctgttgtgggtcgagaccactatggtgtgtttccattgagaggcaaattgctcaat
gtgcgggaagctagtagtaaacagataatggagaacgaagaaattcaaaatataaagaag
attcttggactgcagcaaaacaaagagtacacaaatgtgaagtctttgagatatggtcat
ttgatgattatggctgatcaggatcatgatggctcccacatcaaagggctgctgataaat
ttcattcattcattctggccatcactgcttaaagttccatctttcatggttgagtttact
actcccattataagggctactcattcaaacgggaccaaactatcattttattcgatgccg
gaatatgaagcgtggaaagaaacattggggaatgcaagtggttggcagataaaatactat
aaggggttgggtacaagtactccccaagaagggcgagagtactttcgagatcttgataag
cacaaaaaagacttcgtttgggatgatgaactcgatggaaatgcaattgagctggcattc
agtaagaaaaaagctgaagaccggaagatctggattcgtaattttgagcctggcacttgt
cgtgatcatgaagccaaacttataaactacaaggactttgttaacaaagagcttatattg
ttctcaatggcagatctccaaaggtccattccctccatggttgatggccttaaacctggt
caaaggaaaattcttttctgttcatttaagaaaaagttggtcaaagaaattaaagttggg
caattcataggttatgtgtctgagcactctgcttaccaccatggtgagcaaagtcttgct
agcacaattattggaatggcacaggactttgtcggcagtaacaacatcaatcttctcaaa
ccaaatggtcaatttggtactcgaaacttgggcggtaaagaccatgcaagttccagatac
atttacactgagctaaatacggttactcgaagcctcttccatgaggatgatgataagctt
cttgaatacttgaatgaggatgggaggtccattgaaccaacctggtacataccaattatt
cctctggttcttgtcaatggtagtgagggaattgggacgggatggagttcttacattccc
aactataatccacgagaaattagtgccaatgttagacgtttgttgaatggtgaggaaatg
gtgccaatggatccatggtacagaggattcagaggaaccattgagaaaagcgccaaggaa
ggaggctacatagtcaatggctcagtagtggaaatagatgaacaaactttcagaatcaca
gagcttccagtacggaagtggactcaagattataagcagttcctggaatccataactgat
gggactcctaatgtcaaggatcctctcattgaggattttaggcaaaatggggatgatgaa
attgtagacattgaagtcaagatgaaggcagacaaaatagctacaataatgcaagaggga
ttattcaagaaatttaaattgactggcactattagcacaagcaacatgcatctttttgac
gcagagggaaatattaagaaatttgacaatccagaacaaattcttgaagagttctatcca
cttcggctggagtattatgaaaaaagaaagaaatatatactgggcaaccttgaaagactt
ttgttgattttggacaacaaagtcaggtttatattaggggttgtgaatggagaaattatc
gtgagtaaccggaaaaaagctgaattgttgaaagagctgaagcagaaaggttttactccc
atgccaaggaaaggtaaatcctcagaaccacaagttgcaggggcaaatgatgacaattca
gaagagagggaagatggcgagcaggaaactgggactgtcagggttgaagaagcaacttgg
ggtgactatgagtatcttttatccttatctattggaactttgacccttgaaagtgttcag
aagctgcttgatgaaaaggctgaaaaggaaaaggagtttgaaattttgatgggaacccca
tcaaagtcattgtggttgaaggatctggatgagtttgaaaagaaacttgatgagctagat
agcaaagacgcagaagcgggtcgaaagagatcaagccaagcaaaaaaaaataatggtttt
gtttccaaacctgcaaagaagccgccacaaccacgaaagaatactaagaagacacaaaat
gttgagccagataatgataattctccaatggaaattgagaatgctgttggtaagaagcca
ccacaaccacgaaagaacactaagaaaacccaaaatgttgagccagagaatgataattct
tcaatggaagttgagaatgctgttgatattgcaaaaccaaaagggcgagcaggttctaag
aagaatactcccaaggaacctgatgaagaaatgctatctcttcaagaacgtctagctgca
tataacattgaatcatctggtgaaaagtcgcaagccatggaaagtgaagaacctgtgcct
gctatgaagaaacagattaacagagggggtggtgcaaaaaagaagtcaagtactatagtg
ttggatagtgataatgaagttaatgatgttgatgatgatgacgacttcgaagtacatgag
aaggctgccccagttaagaagggagggagaaagcctgctgctcaaaatgccaagaaggca
cctgcaaaggcacctgctgcccccaagaaacgaaatgtaggaaccaagcaattatcaggt
caaaaaatattgactgatatgttgcagccagctgaatcaccagagaagaaagtgaggaag
atgagggagtctccatttaacaagaaaagtggttctatactgggaagggatgctaacaag
gatataagtccacttgctgatttgtctgaaggttctacttctaactctcctattgcagag
gaggaggtggttgagattccaccacagccatcaagggctagacctcagagggccaatcgt
actcaaaagaaatatgttgtgagtgaatctgaacctgagattgatgatgattctgatgac
gatgccgaattatctgattttgaagaagatgatgactag
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integrated database retrieval system
