Trifolium pratense (red clover): 123914070
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Entry
123914070 CDS
T08949
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123914070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123914070
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123914070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
123914070
NCBI-ProteinID:
XP_045821003
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Position
LG3:43874379..43878929
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AA seq
481 aa
AA seq
DB search
MESDLGKLFIGGISWDTDEERLREYFATYGEVIEAVIMRDRATGRARGFGFVVFADPAVA
ERVIIDKHIIDGRTVEAKKAVPRDDQYNITRQTGSVQGSPGPGRTKKIFVGGLPSTITES
DFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKR
AVPKELSPGPTRSPLIGGYNYSLNSRASSYLNNYGQGYSMSPIGGYGVRMDGRFSPLTGG
RTGFTPFGNTGYGMGMNLDSGLSPNFGGNSNFGNNLGYGRIFSPFYSGNSSRYATPIGYN
GGSGRGDSLMNSTSRNVWGNGGLGNANNPVSPGAFLGSGSGAFGVSIGNSGTNWGPSIPA
QGGGAASGYATGNNVYEGGDSSFGLGAAGYGRNSNAVVNPSSTFNASAGGYDGSYGDLYR
SGSGSVYNDSAWRSAASEIDGSGSFGYGLGGIASDDPVKTSEGYIGGYNVASRQPNRGIA
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggatctcggcaagctcttcattggaggaatatcttgggacactgacgaggaa
cgtctcagggagtattttgcgacgtatggggaggtaattgaggctgtgatcatgcgggat
cgcgcaacaggtcgtgctcgtggttttggattcgttgtctttgctgatcctgctgttgct
gagagagtcattatcgataagcacataatcgacggccgcactgttgaagcaaagaaagct
gttcctagggatgatcagtacaatataaccagacagactggtagtgtgcagggatcgcct
ggtcccggtcgtacaaagaagatttttgttggaggcttaccatcaacaatcaccgaaagt
gatttcaagatgtattttgatcaattcggtacaattactgatgttgtagttatgtatgat
cacaatacacaaaggccaagaggttttggcttcatcacatatgattcagaagaagcagtc
gatagagttctttacaaaacatttcatgaactcaacggaaagatggttgaagtcaagagg
gcagttccgaaagaactttcacctggtcccacccgaagcccattgataggaggatataac
tatagtttgaacagtagagctagtagctacctaaacaattatggtcagggttatagtatg
agtccaataggaggatatggagtcagaatggatggtaggtttagtccacttactggtggc
agaaccggttttacccctttcggaaacaccggttatggaatggggatgaacttggattcg
ggattgagcccaaattttggaggaaactctaatttcgggaacaatttaggttatggtcgg
atatttagtcctttctatagcggaaactcgagcagatatgctacaccaataggctataac
gggggtagtggaagaggcgattctcttatgaactcgacttctaggaatgtctggggcaat
ggtggtctgggtaatgctaataaccccgtcagccctggtgcgttcttgggatctggaagt
ggagctttcggtgtttccattggaaacagcggcacaaactggggtccttcgattccggct
cagggtggaggagctgcttctggctatgctactgggaataatgtttatgaaggtggagat
agcagctttggattaggtgcagcaggatatggaagaaacagcaatgcagttgtgaatcca
tcctccacatttaatgcatcagccggcggttatgacggatcttatggagacttataccgc
agtggcagcggttcagtttacaatgactctgcttggagatctgctgcttctgagatagat
ggttctggttcgttcggttatggtcttggcggtattgcatcagatgatcctgtgaagact
tctgagggctatattggaggctacaatgttgcaagtagacaacctaatagaggtatcgct
gcttag
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