Trifolium pratense (red clover): 123914218
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Entry
123914218 CDS
T08949
Name
(RefSeq) heat stress transcription factor A-5-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123914218
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
123914218
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
DUF3437
DUF3450
Motif
Other DBs
NCBI-GeneID:
123914218
NCBI-ProteinID:
XP_045821244
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Position
LG3:complement(11193669..11197256)
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AA seq
486 aa
AA seq
DB search
METAPLSSATAAGNGGGPAPFLQKTYDMVNDPSTDEIVSWSSTNNSFIVWNPPEFARVLL
PTYFKHNNFSSFIRQLNTYGFRKTHAERWEFANDDFIKDQKHLLKNIHRRKPIHSHSNPP
GSVVDPERASYDEQIEKLSREKSSLESNLLSYKHHHSKTKLHLDEFQQRLDGIENRQKKL
LNNFEKALQNPSFVDQLLRKIEFMDLAALNKKRRLPEVDHVQPVAEGSLVDNHSNFRPEF
GNVFQQDFSNKLRLELSPAVSDMNLVSGSTQGSNEDEEIPQKNLSDGELKGTQTRTGLAF
ASETVDLADTGTSFTFNMDSCLSRRATTTENPNLHSLEPSSEEGDSHISCQLNLTLASCP
LEFNRNSYSARSPQIDCQEIGNLAESRVTVIGKESESGVSLNRIVANGVISLASPQEASG
NGQVKPAAPHAVNDVFWEQFLTERPGCLDNEEAISNYRANPYDEQEEGRAVHGISSNIKN
MDNLTL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgctccgctctcatcggctaccgctgccggaaacggtggaggtccggcaccg
tttcttcagaaaacgtatgacatggtgaacgatcccagcacagacgagatcgtttcatgg
agctctaccaataacagcttcatcgtttggaatcctcctgaatttgctcgcgttcttctt
ccaacctatttcaaacacaataatttctccagcttcattcgtcagctcaatacttatgga
tttcgaaaaacacatgctgagcgttgggagtttgctaatgatgattttataaaagatcaa
aagcatcttctgaagaatatacaccgcaggaaacctatacacagtcatagtaatcctcca
ggttctgttgtagatcctgaaagggcgtcatatgatgaacaaatagagaaactctcacgc
gagaaaagttctcttgaatccaatctcttaagctacaaacaccatcactcaaaaacaaag
cttcacctggatgaatttcagcagcgtttggatggtattgagaacaggcaaaaaaaattg
ctgaacaactttgagaaggctcttcagaatccttcttttgttgatcaacttttgcgcaaa
atcgagttcatggatttggcggcattaaataagaaaaggagattgcctgaggttgaccac
gtgcagcctgttgctgaaggtagcttggttgacaatcatagcaattttcgaccggaattt
ggaaatgttttccaacaagatttctcaaacaaactcagactggaattgtcaccagctgtc
tcagatatgaacttggtatcaggtagcacacaggggtcaaatgaagatgaggaaatccca
cagaagaacctttctgatggagaactaaaaggaacacagacaagaactggccttgctttt
gcgtctgaaacagtagatcttgcagatactgggacgtcttttacttttaacatggattcg
tgtttgtcacgaagagcaacaactactgagaacccaaatcttcactctctggagccaagt
agtgaagaaggtgatagccatatatcctgccaactgaatttaactttggcatcttgtcca
ttggaattcaacaggaattcatactccgcccgatcaccccaaatagactgtcaagaaatt
ggcaatttggcagaatcaagagttaccgtcattggtaaagaatctgaaagtggagtttcc
ttaaaccgaattgtggctaacggggttatcagtttagcttcaccgcaggaggcttcaggt
aacggccaagtcaaaccagctgctccacatgcagtgaatgacgtgttttgggaacagttc
ctcactgaaagaccaggctgtttagacaatgaagaggcaatatccaactatcgagcaaat
ccatatgacgagcaagaggaagggcgagcagttcatggaatctccagtaacatcaagaat
atggataatctcacactttga
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