Trifolium pratense (red clover): 123914223
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Entry
123914223 CDS
T08949
Name
(RefSeq) probable acyl-activating enzyme 16, chloroplastic isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00061
Fatty acid biosynthesis
tpra00071
Fatty acid degradation
tpra01100
Metabolic pathways
tpra01212
Fatty acid metabolism
tpra04146
Peroxisome
Module
tpra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123914223
00071 Fatty acid degradation
123914223
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123914223
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpra01004
]
123914223
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123914223
Enzymes [BR:
tpra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123914223
Lipid biosynthesis proteins [BR:
tpra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123914223
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of breast milk
123914223
Exosomal proteins of breast cancer cells
123914223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
123914223
NCBI-ProteinID:
XP_045821250
LinkDB
All DBs
Position
LG3:complement(11227811..11234749)
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AA seq
710 aa
AA seq
DB search
MSTIHAFPLFFTTITLPRNNFVPPRFRVFSQSKTADTVQIRKCSPFLESSLLFGNDNDAV
ASNEWKAVPDIWKYSAEKYGDKVALVDPYHDPPSTITYKQLEQAILDFAEGLRVIGVRPD
EKLALFADNSCRWLVADQGMMASGAINVVRGSRSSVEELLQIYNHSESVALAVDGPEMFN
RIAKTFYSKTSMRFIILLWGEKSSLSLIAEENKEVQVFSFTEVIDLGRESRSALSDSHEA
SQQYVYEAINSDDIATLVYTSGTTGNPKGVMLTHRNLLHQIKNLWDIVPAEVGDRFLSML
PPWHAYERACEYFIFTCGIEQVYTTVRNLKDDLKLYQPHYLISVPLVFETLYSGIQKQIS
TSPPVRKLVALTFLRVSLAYMEYKRIYEGKCLTRNTEQHSFIHSMLDWLWARIIATILFP
IHLLAAKLVYSKIHSAIGISKAGISGGGSLPLQVDKFFEAIGVKVQNGYGLTETSPVIAA
RRPRCNVIGSVGHPVQHTEFKVVDSETDEVLPPGSKGILKVRGPPVMKGYFKNPLATNQA
LDRDGWLNTGDLGWIVPHHSTGRSRNSSGVVVVDGRAKDTIVLLTGENVEPAELEEAAMK
SSTIQQIVVVGQDKRRLGAVIVPNSEEVLKVARELSLIDSISSDVSEEKVMNIIYKELKT
WMSESPFQIGPILLVNEPFTIDNGLMTPTMKIRRDKVVVKYKEQIENLYK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtctactattcatgcctttcccctcttcttcaccacaatcacacttcctcgtaacaac
tttgtccctcctcgttttcgtgtcttttcacaatccaagacagcagacacagtgcagata
agaaaatgttctccttttctagaaagttcattactttttggtaatgataatgatgctgta
gcctcaaatgaatggaaagcagttcctgatatttggaaatattctgctgaaaaatatggt
gataaagttgcattagtagatccatatcatgatcctccttcaactatcacatataaacag
ttggagcaagcaattttggactttgctgaaggattaagagttattggtgtaagaccagat
gaaaagcttgcactttttgctgataattcgtgtcgttggcttgtagcagatcaaggcatg
atggcaagtggagcaatcaatgtggtaagaggatcaaggtcatcagttgaagagttattg
caaatatacaaccactctgaaagcgttgcacttgccgtggatgggcctgaaatgtttaac
cggattgcaaaaacattctattcaaagactagcatgagatttatcattttgctttgggga
gaaaaatcaagcctgagcctgattgctgaagaaaacaaggaggtgcaagtcttcagtttc
acggaagtcatagatttggggcgtgagagtcgcagtgcattgtcagattctcatgaagct
agtcaacaatatgtttatgaagcaatcaactcagatgacattgctactcttgtatacaca
agtggaacaaccggaaatcctaaaggtgttatgcttacccatcggaaccttctgcatcag
ataaaaaatttatgggacattgtacctgctgaagttggagacagatttctaagcatgctg
ccaccttggcatgcatacgaaagagcttgcgagtattttatcttcacatgcggtattgag
caagtatacacaactgtgagaaacctcaaggatgatttgaaactttaccaaccgcattac
ttgatttcggttcctttagtttttgaaacattatacagtgggatccagaagcagatatct
actagcccccctgttagaaagcttgttgcattaacattcttaagagttagcttagcatac
atggaatataaacgtatttatgagggtaaatgtctaacaaggaatacggagcagcattcc
tttatccactcaatgttggactggttatgggcaagaattatcgccacaatattatttcct
attcatcttctggcagcaaaactcgtgtacagtaaaatccattcagctattggaatatca
aaggctggaataagtgggggcggtagtttgcctctgcaagtcgataaattttttgaggca
attggagtgaaagtgcaaaatggatatggattaacagaaacttcaccggttattgctgct
cgacgacctagatgtaatgttattggatccgttgggcatccagttcagcatacggaattc
aaagtagtagattctgaaactgatgaagttcttccaccaggttcaaagggcattttgaaa
gtcaggggtccacccgtgatgaaaggatacttcaagaatccattagctacaaaccaggcc
ttagatagggatggctggctgaatactggtgatctagggtggattgttccccaccattct
actggacggagtcgtaattctagtggtgtggttgttgtggatggccgtgctaaagacact
attgtgcttttaacaggtgaaaatgttgaaccggcagaacttgaagaagcagctatgaaa
agtagcacgattcaacaaatcgttgttgttggtcaggataaacgacgtcttggagctgtc
atcgttcctaacagcgaagaagttttgaaggtagcaagggaattgtcacttatagattcc
atcagttctgatgttagtgaggaaaaagtgatgaacataatatataaagaattaaagacc
tggatgtcagagtctccatttcaaattggaccaatccttcttgtaaatgaacccttcaca
attgataatggtctaatgacaccaaccatgaaaattcgaagggataaagttgtggttaaa
tacaaggagcaaatagaaaatttatacaagtaa
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