KEGG   Trifolium pratense (red clover): 123914397
Entry
123914397         CDS       T08949                                 
Name
(RefSeq) protein NEDD1-like
  KO
K16547  protein NEDD1
Organism
tpra  Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tpra03036]
    123914397
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tpra04812]
    123914397
Chromosome and associated proteins [BR:tpra03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     123914397
   Microtubules and associated factors
    gamma-tubulin ring complex
     123914397
Cytoskeleton proteins [BR:tpra04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     123914397
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_RIG_2nd WD40 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 EIF3I WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 NYD-SP28_assoc PROPPIN NBCH_WD40 PsbK PAN2_N
Other DBs
NCBI-GeneID: 123914397
NCBI-ProteinID: XP_045821485
LinkDB
Position
LG3:28649086..28658047
AA seq 789 aa
MSLLAASGGDTVKLFDASDRLFDSSVKPGDPCTLSFTPTAGSQVNSVKWNHTNLVVASAG
DDKRISLWRKNGQSMGTIVAGTDSVDNIEDTILAISFSNKASRYMCSGGSGQVVKIWDLQ
RKRCIKWLKGHTNTVTGVMYNCKDEHLASISLSGDLILHNLASGQRAAELKDPNQQMLRV
LDYSRVSRHLLVTAGDDGTVHLWDTTGRNPKVSWMKQHSAPTAGIGFSPSNDKIIASVGL
DKKLYTYDSGSRRPTSCISYEAPFSCLAFRDDGWMLAAGTSNGCVAFYDVRGKPQPFGVL
HAYGSSEAVTSLCWQRSKPVIVDERSCTAESALIGNSVEDSILMPDPLPSATSSSISTSV
SSTWNSGRLGSSIDTSSLATSSSGFTTSLQNVSTGEETPQRNHLWPGGTLSRLHAPRGSY
NFKDDMEVFSPLVDVTPITPSLWDENGAKKDILFSDRKPVLFRSSSRRFPSSEDVSSDHV
IADWKSSSTAKQDITHSSFPLVGLTPPSTKSEESSITPPEAWGGEKLPDKYTCPAVNAPS
RFGMLASSGQTAGSMLSGLQDTSSSTGIDSYTSSSLNFSNLRTKDVSTGQETSLGFTDHM
FATSMPLSSISTKTSLGQTNIDSPKLSDSPRTSAFSRRISSYAERIGIASSFGDGASLSV
GSPKIKKSGAETREELLNSLLLKSDISIPTDSGSLTNGAIPQQKPSQSDAQGSSFTLQLF
QRTLDETLDSFQKSIHEDVRNVHLEILRQFHLQEIEMSTAMNSILENQAELLKEVKSLRK
ENEQLRRLL
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgtcgttgttggccgccagtggcggcgataccgtcaaactatttgacgcctccgacaga
cttttcgactcttccgttaaacccggcgatccttgtactctcagtttcactcccactgcc
ggttctcaagtcaattcagtcaagtggaatcacacaaatttggttgttgcaagtgctggt
gatgataagaggatctctctgtggagaaagaacggacagagtatggggactatagtggct
ggtactgatagtgttgacaatatcgaggacacgatattagcaattagtttcagcaacaaa
gcatccagatatatgtgttctggaggaagcggtcaagttgtaaagatatgggatttgcaa
aggaagcgctgtattaaatggctaaagggtcatactaatactgtcacaggtgtgatgtac
aattgtaaagatgaacatttggcttctatcagcctcagtggggaccttatacttcataac
ctggcttctgggcaaagggcagctgaactcaaagatcccaatcaacagatgttgagagtt
cttgattattctcgggttagtcgtcaccttctcgtgacagctggtgatgatgggacagta
catttgtgggatacaactggacgcaaccctaaggtttcatggatgaagcagcattctgca
cctactgctggaattggcttctctccgtccaacgacaagatcattgctagtgttggtctt
gataagaaattatacacttatgactctggatctagaagaccaacatcttgcatttcttac
gaagctcctttttcttgtttggcattcagagatgatggttggatgctggccgccggaact
agcaatgggtgtgtcgctttctatgatgtccgtggaaaaccacaaccttttggtgttctt
catgcttatggtagttcagaggctgttacaagcttatgttggcaaagatcaaaaccagtt
attgtcgatgaaaggagttgcactgctgagagtgctcttattggaaattctgttgaagat
tcaatccttatgcctgatcctttaccttctgcaacttcatcaagcatttccacatctgtg
tctagtacttggaattctggtcggctgggttcttccattgatacatcttcacttgcaaca
tccagcagtggatttactacaagcctacaaaatgtgtctactggagaggaaacaccacag
cgaaaccatttatggccaggtggaacactgtccaggttgcatgctccacgtggtagttat
aacttcaaggatgacatggaggtattctcccctcttgtggatgttacaccaataacacct
tcactgtgggatgaaaatggggcaaagaaggatattttattttcagataggaaacctgtg
ttgtttcgatcatctagtcgaagatttccaagttcagaagatgtaagcagtgatcatgta
atagctgattggaagtctagctcaactgccaagcaggatatcactcattcttcctttcca
cttgtggggttaactcctccatctacaaagagtgaagagtcttccatcactcctccagaa
gcctggggtggtgagaagttacctgataaatatacttgtccggctgtaaatgcaccatct
cgttttgggatgttggcttccagtggtcaaacggcaggatcaatgctttctgggttacag
gatacatcgtcatcaactggtatcgattcctatacaagttcaagcctaaatttttcaaat
ttacgcaccaaagatgtttctacaggccaggagacttcattggggtttactgatcacatg
ttcgctacttctatgcctttgtcctccatcagtacaaaaaccagccttggacagacaaac
attgactccccaaaattgtctgattctcctagaacgtcagctttttctagaagaatttct
agttatgcagaaagaattggcattgcatcttccttcggtgatggagcatctctttcagtt
ggttcacctaagattaagaaatcaggagcagaaaccagagaagaacttctaaatagcttg
ctattgaagtctgatatatctattccaacagattcaggctctctaacaaatggagcaata
ccacaacagaaaccatctcagtcagatgcacaaggatcgtcatttacactacagcttttt
cagcggacactggatgaaactctagattcctttcagaaatccatacacgaggatgtgaga
aacgtccatcttgaaatattaagacagtttcatctgcaagagattgaaatgtcaaccgca
atgaactcaattctggaaaaccaagctgagttgttgaaagaagtgaagtctctgcgtaag
gaaaacgagcagcttagacgattgctttga

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