Trifolium pratense (red clover): 123915374
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Entry
123915374 CDS
T08949
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Module
tpra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123915374
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
123915374
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
123915374
NCBI-ProteinID:
XP_045822454
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Position
LG3:complement(52205254..52207302)
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AA seq
394 aa
AA seq
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MKVLFSLLLVLVIASPSLCSKVRESNIPNAFNIGNYGAKGDGHTDDSNSFLKAWKDACSS
TKDTPTLIVPADKIFMTQPLTFQGPCKSATMNVTISGTITAPPNCEHWKSNGNDHDSWIT
FSHISGLVVNGGGTLNAQGDSWWDKSSSHRPTAVRFLGCNNLKHGPMTHLNSPRNHISIT
GCDDVLISNVNLTAPETSPNTDGVDISSSTKVFIEHSTISTGDDCVAINSGSKFINITNV
NCGPGHGISVGSLGKNGEYSTVEEVYVSDIIFTRTTNGARIKTWEGGSGYARKIIYNNIT
LDGVKNPVIIDQQYDALQYAGKGVKISDVTFRNFRGTTKDKIAIKLNCCSIGCTNIVLEE
INISGLNGERSSSSCKNAHGSSSSCNPTVTCLNN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttttgttttctcttcttctagtgttagtcattgcttcacctagtttatgctct
aaagtacgagagtctaatattccaaatgctttcaatattggtaattatggtgccaagggt
gacggccatactgatgattcaaattcatttttaaaagcatggaaagatgcgtgcagttca
actaaagataccccaacactcatcgtacccgcagataaaatattcatgacacaacctctt
acatttcaaggtccttgcaaatccgcaaccatgaatgttacgattagtggaacaatcact
gctccaccaaattgtgaacattggaaatcaaacggtaacgatcacgattcatggataaca
ttcagtcatataagtgggcttgttgtgaatggaggtggaactcttaatgcccaaggtgat
tcttggtgggacaagagttcaagtcataggccaacggctgttcgttttcttggatgtaat
aatctaaaacatggcccaatgacacacctcaacagtccaagaaatcatataagcataact
ggatgtgatgacgttttaatttctaatgttaatttaactgcaccagaaactagtcccaac
accgatggagttgatatttcatcatcaaccaaagtcttcattgagcattcaaccatctca
actggtgacgattgtgttgctattaatagtggttctaaattcatcaacattactaatgtt
aactgtgggcctggtcatggcattagtgttggaagccttgggaagaatggggaatattct
acagtagaggaggtatacgtttcagatatcatcttcactcgaacaacaaatggtgctaga
attaagacatgggagggaggatctggatatgcaaggaagataatttataacaatattaca
cttgatggagtgaagaatcctgtgataattgatcaacaatacgatgctttacaatatgca
ggcaaaggagtgaaaatcagtgatgttactttccgcaactttcgaggaaccacaaaagat
aaaattgcaattaaattgaattgttgcagtattggttgcactaacattgttcttgaagag
atcaacatatctggtcttaatggagagagatcgtcttcatcgtgcaaaaatgcacatgga
tcaagctcttcgtgcaatcctactgtcacatgcctcaacaattaa
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