Trifolium pratense (red clover): 123915396
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Entry
123915396 CDS
T08949
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123915396
03036 Chromosome and associated proteins [BR:
tpra03036
]
123915396
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123915396
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123915396
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
123915396
microRNA pathway
RISC loading complex
123915396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
123915396
NCBI-ProteinID:
XP_045822471
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Position
LG3:53044874..53050367
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AA seq
887 aa
AA seq
DB search
MMKLIKESLTNITYFYPMKETSNSDRLSMARISLGSKGSKIQLLTNHFRVGLSKNNGYFY
HYNVALCYQDGHLVEVKGTRRKVIDKLCETYDVLKHKNFAYDGDKSLFALGSLHHNKQEF
IVVLEEVSSMRVGRNPYEATKKMRRQSRSKTFKVEITYLAKIPLQAIANVVQGRESEHYQ
EVLNVLDVILSQNATKQGCLRIRQSYFNDNPRNITNIDGGVQCCRGYHSSFKVTQKGLSL
NVDVSTTLLLKPGPVVDFLLQNQNVQQTNLIDWTKARRMLKNIRIKANNREYKITGLSEM
SCRTEKFLIKNGNDVNGQMKLSEITVYEYFKHKKNIELNYSIDMPCINVGKSKNPTYFPI
ELCTLVSLQRYTRVLSNKQRAQMMLQSKNSPHERKEALQYSLKNSRYDSEPMFRSFGITI
EPCFTQVDGRVLQPPTVVVGSGLNICPRNGSWNLNDKKLVEPVEIKRWAIVNFSSRCAVK
HLGSLIKKCSEMKGMLIHRPFDVFEEDSRYRSESPSSRVARMYEKLKAKMPGPPKDPPAQ
LLLCILPVKNCELYGPWKRKCLVDEGIATQCIAPTQNINDHYINNVLLKINAKLGGMNSL
LLSEVTRSIPLFSNIPTLVIGMDVSHGSSYQSNVPSIAAVVSSRYWPQISRYKAVVRAQP
SKVEMITSLFKPVSDAKDDGIICELLKDFRATSGMKPKQIIIFRDGVSDSQFNQVLDIEL
EEIIKACKHLDENWCPKFTVIVAQKNHHTRFFKPNAPQENVSPGTVIDNTICNPKNNDFY
MCAHAGRIGTSRPTHYHLLFDEIGFSADNLQELVHSLCYVHQRSTSAISIVAPIYYADLA
AAQMAHLMKFDESETLSSHNESTSADISQVLELPRLHERVANSMFFC
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagttgataaaagaatctcttactaatattacatatttctatccaatgaaagaa
acatcgaattcggaccgtttgtctatggctaggataagtcttggatccaagggaagcaag
atacaactcttaactaaccattttagagttggccttagcaagaacaatggctacttctat
cactataatgtcgctttatgttatcaagatggacacttggttgaagtgaaaggtacgagg
agaaaagtcatagacaaactttgtgaaacgtatgatgtattaaaacacaagaattttgca
tacgatggcgacaaaagcttattcgctcttggttctctacatcataataaacaagaattc
attgttgtgttagaagaagtttcatcaatgagggttggaagaaacccctatgaagcaacc
aagaaaatgaggcgtcaatctcggtctaaaacttttaaggttgagattacatatttagct
aaaatcccattacaagcgattgcaaatgtagtacaaggtcgagaatctgagcattatcaa
gaagtattgaatgttctagacgtaatattgagccagaatgcgacaaagcaggggtgtctt
cgtattcgccaatcatactttaatgataatccaaggaatattacaaatatcgatggtggt
gttcaatgttgtcgcggttaccattccagcttcaaagtcacacaaaagggtttatctctc
aatgttgatgtgtcaactacattacttttaaagcctggtcctgtagtggatttccttctc
cagaaccaaaatgttcagcaaacaaacttgattgattggaccaaggcaagaagaatgctg
aaaaatattagaatcaaggctaacaatagagagtacaaaatcactggactaagtgaaatg
tcttgcaggacagaaaaatttttaattaaaaatggaaatgatgttaatggtcaaatgaaa
ttaagtgaaataacagtttatgaatacttcaaacacaagaaaaatattgaactcaactat
tctattgatatgccatgcatcaatgttggcaaatcaaagaatccaacttattttcctatt
gagttatgcacattagtctcgttacaacgatacactagggtactgtcaaataagcaaaga
gctcaaatgatgttgcagtcgaagaatagtcctcatgaaagaaaagaagctttgcaatat
tctttaaaaaatagtagatatgactctgagcctatgtttcgctctttcggaattactatt
gaaccttgttttactcaagtcgatggtcgtgttttgcaacctccaacggttgttgtcgga
agcgggcttaacatttgtccccgaaatgggagctggaatttgaatgataagaaactagtt
gaacctgtggagattaagcgttgggccattgtaaacttttcatcgcggtgtgctgtaaaa
catttgggcagtttgattaaaaaatgctctgaaatgaaagggatgctcatacatcgtccg
ttcgatgtatttgaagaggacagtcgctatagaagtgagtcgccatcttctagggttgct
agaatgtatgaaaagttaaaggccaagatgcctggaccccctaaggatcctccggctcaa
cttcttttgtgtatcctaccggttaagaattgtgagctttatggtccttggaaaaggaaa
tgtcttgttgatgaaggaattgcaacacaatgcattgctccaacacaaaatattaatgat
cattacattaataatgtactattgaaaatcaatgcaaagcttggtgggatgaattcatta
ttgttatccgaagttacgcgttccataccattgttttctaacatacctacattggttatc
ggaatggatgtttcacatggatcttcgtatcaatcaaatgttccgtccattgctgcggtt
gtgagctcgagatattggcctcaaatttcacgttacaaagctgtagtccgcgcacagcca
tcaaaagtagagatgattacatctctattcaagcctgtttcagatgctaaggatgacggt
atcatctgtgagttgcttaaggacttccgcgcaacttcaggaatgaagcctaaacaaatt
ataattttcagggatggagtgagtgattcacagttcaaccaggttctcgacattgaatta
gaagaaatcataaaggcatgcaaacatttagatgaaaattggtgtccaaagtttactgtg
attgttgctcagaagaatcaccatactagattcttcaaacccaatgctcctcaagaaaat
gtttcacctggaactgttattgataacactatatgtaatcccaaaaacaatgacttctac
atgtgtgcacatgctggaaggattggtacaagtcgccctactcattaccatcttttattt
gatgaaattggattctcagcagataatttgcaagaattagtgcattctctatgttatgtg
caccagaggagcacaagtgccatatcaatagttgcaccaatatattatgctgacctagca
gctgctcagatggcacatttgatgaaatttgatgagtcagagactctttccagccacaat
gaatccacctctgcagatatatctcaagttctcgagttaccacgtcttcatgaacgagtt
gccaattctatgtttttttgttag
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