Trifolium pratense (red clover): 123915465
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Entry
123915465 CDS
T08949
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial-like
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123915465
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
123915465
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
123915465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRORP
PPR_long
PPR_2
TPR_24
PPR_3
RNase_Zc3h12a
Motif
Other DBs
NCBI-GeneID:
123915465
NCBI-ProteinID:
XP_045822540
LinkDB
All DBs
Position
LG3:complement(4305346..4309060)
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AA seq
731 aa
AA seq
DB search
MATSSPLTLQLQQSFCFSHSLRHTLLSNYDYESFPSTTTTRKLTAIQCSSHNSPVETTTK
NSVRRVSNKTTSPSSSHTDKRVSLESKSVNSTTSYKVVEKKKNNENETKNVVEKKNTNTK
KKKIKDTPQVKLQYSLDMCSKRGDLKGALSLYDSTISQGVKLSQRHYTVLLYLCSSAAIG
VLQPAKSGSRTRTLNAQVAVDINDNDDDDDDRYGSDNNDNTLLDNSVSVSHSDDDSDNDM
DKDKRNAILVSEDVKKHALQRGFEVYENMCLNKVEMNEAALTSVARMAMAMGDGDMAFEM
VKQMKILGINPRLRSYGPALSTYCNNKEIDKAFDVENHMLEHGVYPEEPELEALLRVSMR
AGKSDRVYYVLHKLRSSVRKVSTFTADLILDWFKSKMASRVGRRKWDKGLIMEAMENNGG
GWHGIGWLGKGKWQVLHTSVGNDGMCKCCGVQLATIDLDPVETENFAKSVASIAISKEKN
SNFQTFQKWLDYYGPFEAVIDAANVGLFSQGKFMPSKINAVVNEMRHKLPSKKFPLIVLH
HRRIKGDKRDGPINKALVDRWNNAAALYATPTGSNDDWYWLYAAIKFKCLLVTNDEMRDH
LFQLLGNDFFPKWKERHQVRFGFSDAGLGFYMPPPCSVVIQESEEGHWHIPIEAELNDEA
DRRWLCITRAKLDMVSKDSSTTFKDEKPRKNGARADSVARNESAKELQYQTIVNHKDMKE
TSQQLYKNLRS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcttctcccctcactctccaactccaacaatctttctgtttctctcattca
ctcagacatactctactctcaaattatgattatgaatccttcccttccacaaccaccaca
agaaaacttactgcaattcaatgttcttcacacaactctccagttgaaaccaccaccaaa
aactcagtaagaagggtttccaacaaaaccacttctccttcttcatctcatactgacaaa
agggtttctttggaatcaaaatcagttaacagtactaccagttacaaggttgttgagaaa
aagaagaataatgaaaatgaaactaaaaatgttgtggagaagaagaatactaatacgaag
aagaagaagattaaggacaccccacaagttaaattgcagtattctttggatatgtgttct
aaaagaggtgatttaaagggagctttatctttatatgattcaacaatttctcaaggtgtt
aaattgtcacaacgccattatactgttcttttgtatctttgttcttctgcagctattggt
gttcttcaacccgcgaaaagtggaagtcgtactagaacgttaaacgcacaagtcgcggta
gatataaatgacaatgatgatgatgatgatgatagatatggtagtgataataatgataat
acattgttggataattcggtttcagtttcacatagtgatgatgacagtgacaatgacatg
gataaggacaagaggaatgctattttggtgagtgaggatgttaagaaacatgcacttcag
agaggatttgaagtgtatgagaatatgtgtttgaataaggttgaaatgaatgaagcagca
ttgacatctgtggcaagaatggccatggcaatgggcgacggcgacatggcttttgagatg
gttaaacaaatgaagattttagggataaatcctaggttaaggtcttatggtcctgcttta
tctacttattgtaataataaagaaatagataaagcatttgatgttgaaaaccacatgttg
gaacatggtgtataccctgaagagcctgagttagaagcactcttgagagtaagcatgaga
gctggtaagagtgatagggtctattatgtgttgcataaactaagaagtagtgtgagaaaa
gtctcaacttttactgcagatttgattcttgattggtttaagagcaaaatggcttcaaga
gttgggagaagaaaatgggataaaggattgataatggaagcaatggaaaataatggtgga
ggttggcatgggataggttggttaggtaaggggaaatggcaagttcttcatactagtgtt
ggaaatgatggaatgtgtaaatgttgtggggtgcaattagctactattgatcttgatcct
gttgaaactgagaattttgctaagtcagttgcatccattgctataagtaaagagaaaaat
tccaacttccagacatttcaaaaatggcttgactactatggaccttttgaagcagtgata
gatgctgcaaatgtaggtcttttcagccaagggaagttcatgccatccaagatcaatgct
gttgtcaatgaaatgcgccacaaactcccttcaaagaagtttccgcttattgttttacat
cataggcgtatcaaaggggataaaagggatggaccaatcaacaaggcattggttgataga
tggaataatgccgctgcactctatgcgacacctaccggatcaaacgatgattggtactgg
ttgtatgcagctataaaatttaaatgcttacttgttacgaatgatgagatgagagatcat
ttgtttcaacttctcggaaatgacttcttccccaagtggaaagaaaggcatcaggtacgc
ttcggtttctctgatgccggtcttgggttttacatgccgcctccttgttctgttgttatt
caggaatcagaagaaggccactggcatattccaattgaagccgaacttaacgatgaagcg
gatagaagatggttgtgcatcacacgggctaaattggacatggttagcaaagattcttca
acaacatttaaagatgagaaacctcggaaaaatggagcacgtgcagactcagttgctaga
aatgagtctgcaaaggagttgcaatatcagactattgtgaatcacaaggatatgaaagaa
acatctcaacaattatacaaaaatctcagatcataa
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