KEGG   Trifolium pratense (red clover): 123915659
Entry
123915659         CDS       T08949                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03013  Nucleocytoplasmic transport
tpra04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123915659
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123915659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123915659
   04131 Membrane trafficking [BR:tpra04131]
    123915659
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123915659
Membrane trafficking [BR:tpra04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    123915659
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    123915659
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    123915659
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 123915659
NCBI-ProteinID: XP_045822816
LinkDB
Position
LG3:44310289..44312393
AA seq 301 aa
MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNSASQHLATLTGHQGPVWE
VSWAHPKFGSLLASCSYDGRVILWKEGNQNEWVQAHVFDDHKSSVNSVAWAPHELGLCLA
CGSSDGNISIFTARADGGWDTSRIDQAHPVGVTSVSWAPAMAPGALVGSGLLDPVQKLCS
GGCDNTVKVWKLSNGQWKMDCFPALQMHNDWVRDVAWAPNLGLPKSTIASASQDGKAIIW
TVGKEGDHWEGKVLNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccttcacagaaggttgaaacgggtcatcaagacacggtccatgatgttgcaatggat
tactatggaaagaggctggcaacagcttcttcggatcacacaattaagataatcggtgtg
agcaattcagcctctcagcatctagcaactttgactggtcaccaaggacctgtttgggag
gtctcgtgggctcaccctaagtttggttccctgcttgcttcgtgttcctatgatgggcgt
gtcattctttggaaggagggtaaccaaaatgaatgggtccaagctcatgtttttgatgac
cataagtcatctgtgaattcagttgcttgggcacctcacgaattgggtctctgcttggct
tgtggttcgtctgatgggaatatatctatattcactgcaagagcagatggtggatgggac
acctcaaggattgatcaggctcacccagtaggtgtcacttctgtgtcttgggctcctgca
atggcaccgggggctcttgttggttcagggttacttgatccggtgcagaagctttgctct
ggtggttgtgataatactgttaaggtgtggaagctgagcaacggacagtggaagatggat
tgctttcctgcacttcagatgcataatgattgggttcgtgatgttgcttgggcacctaat
ttgggacttccgaaatcaaccatcgctagtgcatcgcaggatggtaaagcgatcatatgg
actgtaggcaaagaaggggatcattgggaaggcaaggttttgaatgatttcaagacccct
gtttggagggtgtcatggtcattgacaggaaatatactggctgttgctgatggaaacaac
aatgtgacattatggaaagaagcagtagatggggaatggcaacaggtgacaacagtggag
ccatag

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