Trifolium pratense (red clover): 123915686
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Entry
123915686 CDS
T08949
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00061
Fatty acid biosynthesis
tpra00071
Fatty acid degradation
tpra01100
Metabolic pathways
tpra01212
Fatty acid metabolism
tpra04146
Peroxisome
Module
tpra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123915686
00071 Fatty acid degradation
123915686
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123915686
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpra01004
]
123915686
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123915686
Enzymes [BR:
tpra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123915686
Lipid biosynthesis proteins [BR:
tpra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123915686
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of breast milk
123915686
Exosomal proteins of breast cancer cells
123915686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
123915686
NCBI-ProteinID:
XP_045822843
LinkDB
All DBs
Position
LG3:complement(21080215..21085902)
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AA seq
660 aa
AA seq
DB search
MVDVYTVKVEEARSATHEKPSAGPVYRCIYAKDGLLELPSHFQSPWDFLRDSAARSPSKP
MLGRRHKTDSTKAGPYEWLTYEEAYNAAIQIGSSMRTRGVNPGDRCGIYGSNCPEWIIAM
EACNSYAVTYVPLYDTLGPNAVEFIINHAEVSIAFVQQSKIPSILSCLGRCASLKTIVSF
GNVSTAQKKEAEELGVSCFSWGEFLQLGNLDLDLPLKNKTSICTIMYTSGTTGEPKGVII
KNEAFMTEVLSIDQILSLTDKAATEDDVYFSFLPLAHVYDQIMVTYSLYKGSSIGFWQGD
IRFLMEDIQTLQPTIFCGVPRIYDRVYAGINSKISSEGSWKKTLFQYAYNYKLGYLNSGL
PQDKAAPWIHKLVFDKIKHALGGRVRLMLSGAAPLSMNVEEFLRVTFGATLAQGYGLTES
CAGCFSAITNVFSMTGTVGVPMTTIEARLESVPEMEYDALSNQPRGEICLRGNTLFSGYH
KRQDLTEEVMVDGWFHTGDIGEWLPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCP
LITSIWVYGNSFESFLVAIVIPEKQALEDWAAKHNLSDDFKSLCENIKARKYILDELNSV
DQKHQLRGFELIKAVHLEPTPFDVERDLITPTFKLKRPQLLKHYKDCIDLLYKEVKGAMV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgtatacactgtcaaggtggaagaagcaagatctgcaactcatgaaaaacca
tcagcaggtcctgtgtatagatgcatctatgctaaagatggtttattggagttaccttct
cattttcaatctccatgggactttctcagggattctgctgcgaggagccccagcaaacca
atgttgggacggcgtcacaaaacagattctactaaggctggtccctatgaatggctcaca
tatgaggaggcttataatgctgccatccaaattggttcttccatgaggacccgtggtgtc
aatcctggagaccgttgtggcatatatggatccaattgtcctgaatggataattgcaatg
gaggcttgtaacagctatgcagtaacatatgttcccttatatgacacccttggtcctaat
gctgtagaatttatcataaaccatgccgaagtttcgatagcatttgtacaacaaagcaaa
attccttctattttgtcatgtcttggtcggtgtgcaagtcttaaaactattgtgagtttc
ggtaatgtttcaaccgcacaaaagaaagaagccgaggaacttggtgtatcctgcttctca
tggggagagtttctccagctgggaaatttggatttggatttaccattaaaaaacaagact
agcatctgcacaatcatgtacacaagtggaacaacaggtgaaccaaaaggtgtcattatt
aagaatgaggctttcatgactgaagtattgtccattgaccaaatactttctctaacagac
aaagcggcaaccgaagacgatgtgtacttctcgtttcttcctcttgctcatgtatatgac
cagataatggtgacctatagcctctacaagggctcctcaattggattttggcaaggcgat
atcagattcttaatggaagatattcagacactgcaaccaactatattttgtggtgttcct
cgaatttatgaccgtgtttatgctggtatcaacagcaaaatttcatcggaaggatcatgg
aaaaagacactgtttcagtatgcatataactacaaattgggttatctaaatagtggtctt
ccacaagacaaagcagcgccttggattcataagcttgtgtttgacaagataaaacatgca
ttgggtggacgagttcgactcatgttatcaggagctgctcctttgtctatgaacgtggag
gagtttctgagggtcactttcggagctacgctggcacaaggatatggtctcaccgaaagt
tgtgcgggctgtttcagtgcaataaccaatgtgttttctatgacgggaacagttggagtc
cccatgacaaccattgaagcaaggcttgaatctgtgcctgagatggaatatgatgcgctc
tccaatcaaccccgtggagaaatttgcttgagagggaacaccttgttctccggttaccac
aagcgtcaagatcttactgaagaggttatggttgatggttggtttcatacaggtgacata
ggagaatggctgccaaatggagcaatgaaaattattgacagaaaaaagaacatcttcaaa
ttgtctcaaggagaatatgttgctgtggagaatattgaaaacaagtacttacagtgccct
cttataacatcaatttgggtttacggaaatagttttgaatctttcttggtggcaattgtg
attcctgaaaaacaagccctcgaggattgggcagcgaagcataatttgtctgatgatttt
aaatctttatgtgaaaatataaaggcaagaaaatatattttggacgagctcaacagcgtt
gatcagaaacatcaacttagaggttttgagctgataaaagcagttcatctggaaccaact
ccctttgatgtggaaagagatctaataactccaacattcaaattgaagagaccacaattg
ttaaagcactataaggattgcattgacctgctatacaaggaagtaaagggagcaatggtg
tga
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