KEGG   Trifolium pratense (red clover): 123915746
Entry
123915746         CDS       T08949                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123915746
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpra03041]
    123915746
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123915746
Spliceosome [BR:tpra03041]
 Complex B
  Other components
   Prp19 complex
    123915746
 Complex C
   Prp19-CDC5 complex
    123915746
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    123915746
SSDB
Motif
Pfam: BCAS2 Cnn_1N HEPN_Swt1 DUF2533 ATPase Phage_T4_Y12K
Other DBs
NCBI-GeneID: 123915746
NCBI-ProteinID: XP_045822920
LinkDB
Position
LG3:2983509..2985949
AA seq 257 aa
MGDGSSSSSSNGDVLMLEAPPSYGRSSNSDAEIIDALPYIDDDYSHESVKKEVDRLVEEE
MRRSSKKPSDFLKDFPPLPTFNFEEYPMIGREYERVRAAGKPHSIDRGRYELQLPPPNKM
NDETAWKLSLQTAQRLLQYQTLRMENLDLLLKYGPHAWKQHNQRLEVYLSRMQKLAQEQN
DKIEKVNRERKYHQQNTAYELNALSMQWNELCQKNIDIKVACASVETHLNELRREAAERG
WNLDAITENGQLANSES
NT seq 774 nt   +upstreamnt  +downstreamnt
atgggagatggaagcagcagcagcagcagcaacggtgatgttctgatgctggaagctccg
ccttcttacggtaggtcaagcaattccgatgccgaaataatcgacgcattgccttacatc
gatgacgactacagtcacgagagtgtcaagaaagaagtcgaccgtctcgttgaggaagag
atgcgccgcagctccaaaaaaccttctgatttcctcaaagattttcctcctcttcccact
ttcaatttcgaggagtaccctatgattggtagagagtatgagcgtgtaagagctgctggt
aagcctcattcgattgacagggggagatatgaattacaattacctccgccgaataaaatg
aacgatgaaactgcttggaaactatctcttcaaactgctcaacgtctacttcaatatcaa
actttgaggatggaaaatttggatttgttgttgaaatatggtcctcatgcttggaaacaa
cataaccaacgattggaagtttacttgtcaagaatgcagaaattagctcaggaacaaaat
gataagattgaaaaagttaaccgtgaaaggaaatatcatcagcaaaacactgcatatgag
cttaatgctttgtccatgcaatggaacgagctttgtcagaaaaatatagacatcaaagtt
gcgtgtgcttcagttgaaactcacctaaatgaactgagaagagaagcagcagaaagaggc
tggaacttagatgctatcactgaaaatgggcaattggcgaattcggaatcatga

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