Trifolium pratense (red clover): 123915812
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Entry
123915812 CDS
T08949
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03008
Ribosome biogenesis in eukaryotes
tpra03013
Nucleocytoplasmic transport
tpra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123915812
03008 Ribosome biogenesis in eukaryotes
123915812
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123915812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123915812
03009 Ribosome biogenesis [BR:
tpra03009
]
123915812
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123915812
03036 Chromosome and associated proteins [BR:
tpra03036
]
123915812
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123915812
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
123915812
Pre-60S particles
123915812
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
123915812
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123915812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Gpr1_Fun34_YaaH
Motif
Other DBs
NCBI-GeneID:
123915812
NCBI-ProteinID:
XP_045823016
LinkDB
All DBs
Position
LG3:26678807..26691355
Genome browser
AA seq
1077 aa
AA seq
DB search
MAAEKLRDLTQPIDVPLLDATVAAFYGTGSKQERSAADSILRDLQNNPDMWLQVMHILQN
TQNLNTKFFALQVLEGVIKYRWNALPAEQRDGMKNFISDIIVQLSSNEASFRMERLYVNK
LNIILVQILKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRAELIRATLSTLHAFLSWIPLGYIFESPLLET
LLKFFPVPAYRNLTLQCLTEVASLQFGSFYDVQYVKMYGIFMGQLQSILPPTTNIPEAYA
NGSTEEQSFIQNLALFFTSFYKVHIRILEYTQENISNLLLGLEYLISISYVDDTEVFKVC
LDYWNSLVSELFEPHRSLDTPAASANMMGLQVPAMLPGMVDGHGSQLLQRRQLYAGSMSK
LRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQ
MLKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMIEEQENRFLVMVIRDLLNLCEITKGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKC
KRKFVITQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDALKRDEYIQ
RLMQLPNQKWMEIIGQAHQNVEFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQISTIFL
DMLNVYRMYSELISKSISEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQ
FVPPMMDPVLGDYARNVPDARESEVLSLFATIVNKYKATMIEDVPRIFEAVFQCTLEMIT
KNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQQLKLVMDSIMWAFRHTERNIAETGLN
LLLEMLKKFQGSEFCNQFYRTYFLATENEIFAVLTDTFHKPGFKLHVLVLQHLFCLLESG
ALTEPLWDVATSPHSYPSNAIFVREYTIKLLSASFPNMTTAEVSQFVNGLFESTNDLSTF
KTHIRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPSELQDEMVDS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagaagctcagagatttgactcaaccgattgatgtacctttgctcgatgct
accgtcgccgccttctatggcaccggatctaagcaagagagaagtgctgctgattcgatt
ttgcgggacttgcaaaataatcctgacatgtggcttcaagttatgcatatcttgcagaat
actcaaaatttgaataccaagttctttgccttacaggttctagaaggtgtaattaaatac
agatggaatgcattacctgctgagcaacgagatgggatgaaaaatttcatctcagatatt
attgtacagctttctagcaacgaggcctcatttcgaatggagaggttgtatgtcaacaaa
ctcaacattatattagttcagattttgaagcacgagtggccagcaagatggcgaagcttc
attcctgatcttgtctcagcagctaaaactagtgaaacaatctgcgagaattgcatggct
atattgaaacttttgagtgaagaggtttttgatttttcgagaggagaaatgacacagcag
aagataaaagagcttaaacaatcattgaacagtgaatttcaactcatacatgagttatgc
ctgtatgtgctatcagcatcccaaagggccgagctcatacgcgctacactgtccacatta
catgccttcttatcatggattcccttgggttatatatttgaatcaccgttgcttgagaca
cttctaaagtttttcccggttccggcatatcggaacctaacattgcaatgtttaacagag
gtggcatcccttcaatttgggagtttttatgatgtgcagtatgtcaagatgtatggcata
ttcatgggtcaattgcagagcatactcccgcctaccacaaatatacctgaggcatatgca
aatggctctactgaagaacaatcatttatacagaacctggcactgttcttcacctcattt
tataaggttcacatccgcatcttggaatacactcaagagaatatatcaaatttgctattg
ggccttgaatatcttatcagcatttcatatgtagacgataccgaggtctttaaggtttgt
ttggactactggaattcgttggtgtcagagctgtttgagccacaccgaagtttggatact
cctgcagcttctgcaaacatgatgggacttcaggtaccggcaatgcttcctggtatggtt
gatgggcatggttctcagcttcttcaacgtcggcaactttatgctggttccatgtcaaag
ttgagaatgcttatgatatgtcgaatggctaaacctgaagaggttctcatagttgaagat
gaaaatgggaatattgtccgtgaaaccttgaaggacaatgatgttcttgttcaatataag
attatgagggagactcttatttacttgtcacatcttgaccatgatgatactgaaaagcag
atgctgaagaaattaagcaaacaactcagtggagaggattggacatggaacaatttgaac
acactctgctgggcaatcggatcaatatctggttccatgatagaagaacaggaaaacagg
tttttggtcatggtaattcgtgatttattaaatctgtgtgaaatcacgaagggaaaagat
aacaaagcagttattgcaagtaatatcatgtatgttgttggtcaatatccacggttttta
agagctcactggaagtttctgaaaactgttgttaacaagttgtttgagtttatgcatgag
acacatcctggagttcaggatatggcatgtgacacttttttgaaaatagttcagaagtgc
aagcgaaagtttgtaatcacccaggttggtgaaaatgagccatttgtatctgaacttcta
tcaggccttcccatcactattgcagatcttgaaccccatcagatacactcattctatgaa
tctgttgctcatatgattcaagcagagtctgatgcactaaagagggatgaatatattcag
cgtttgatgcagctcccaaatcagaaatggatggaaattataggtcaggcacatcaaaat
gttgagtttttgaaggatcaagatgtaatacggacggtgcttaatatattacagacaaat
acaagtgttgcatcttctttagggacatttttcctgccccagatctcaacgatcttcttg
gacatgttgaatgtgtacagaatgtacagtgagcttatttcaaaaagtatttcagaaggg
ggaccttatgcatctaaaacatcatatgtgaaacttctacgttcggttaagagggagaca
cttaaactgattgagacattcttggataaggctgaagatcaaccacagattggaaaacag
tttgtgccgccaatgatggatcctgttctgggagattatgctaggaatgttcctgatgca
agggaatcagaggttttgtccctttttgccacaatagtaaacaaatataaagctacaatg
atcgaagatgtaccccgcatatttgaagctgtttttcagtgcacactagagatgattaca
aaaaattttgaggattacccagagcaccggcttaagttcttctctctactccgagccata
gctactcattgttttcctgcactaatctgcttgtcaagtcagcaattgaagcttgttatg
gattcaatcatgtgggcatttcggcatacagaaaggaatattgctgaaacagggctgaac
ctgttgttggagatgctgaagaagtttcagggctcagagttctgtaatcagttctaccgg
acttatttcttggcaactgagaatgagatatttgctgtcttaactgatacttttcataag
cctgggttcaaattacacgtcttggtgcttcaacatttgttttgtctgctagaaagtggt
gcgctaacggagcccctttgggatgttgctacaagtccacattcatacccaagtaatgca
atttttgtacgtgaatatactataaagcttctaagtgcttcttttccgaacatgacaact
gctgaggtttcccaatttgttaatggactcttcgagtctacaaatgatctctctacattt
aaaacccatatacgagattttcttatacagtcaaaagaattttcggcacaggataacaaa
gatctctatgccgaagaggctgcagctcagagagagagagaacggcaaagaatgctttcg
attcctgggctgattgccccaagtgagttgcaagatgaaatggtggactcatag
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