KEGG   Trifolium pratense (red clover): 123915812
Entry
123915812         CDS       T08949                                 
Name
(RefSeq) protein EXPORTIN 1A
  KO
K14290  exportin-1
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03008  Ribosome biogenesis in eukaryotes
tpra03013  Nucleocytoplasmic transport
tpra03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123915812
   03008 Ribosome biogenesis in eukaryotes
    123915812
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    123915812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123915812
   03009 Ribosome biogenesis [BR:tpra03009]
    123915812
   03016 Transfer RNA biogenesis [BR:tpra03016]
    123915812
   03036 Chromosome and associated proteins [BR:tpra03036]
    123915812
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     123915812
Ribosome biogenesis [BR:tpra03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    123915812
  Pre-60S particles
    123915812
Transfer RNA biogenesis [BR:tpra03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    123915812
Chromosome and associated proteins [BR:tpra03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     123915812
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N mTOR_dom Gpr1_Fun34_YaaH
Other DBs
NCBI-GeneID: 123915812
NCBI-ProteinID: XP_045823016
LinkDB
Position
LG3:26678807..26691355
AA seq 1077 aa
MAAEKLRDLTQPIDVPLLDATVAAFYGTGSKQERSAADSILRDLQNNPDMWLQVMHILQN
TQNLNTKFFALQVLEGVIKYRWNALPAEQRDGMKNFISDIIVQLSSNEASFRMERLYVNK
LNIILVQILKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRAELIRATLSTLHAFLSWIPLGYIFESPLLET
LLKFFPVPAYRNLTLQCLTEVASLQFGSFYDVQYVKMYGIFMGQLQSILPPTTNIPEAYA
NGSTEEQSFIQNLALFFTSFYKVHIRILEYTQENISNLLLGLEYLISISYVDDTEVFKVC
LDYWNSLVSELFEPHRSLDTPAASANMMGLQVPAMLPGMVDGHGSQLLQRRQLYAGSMSK
LRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQ
MLKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMIEEQENRFLVMVIRDLLNLCEITKGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKC
KRKFVITQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDALKRDEYIQ
RLMQLPNQKWMEIIGQAHQNVEFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQISTIFL
DMLNVYRMYSELISKSISEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQ
FVPPMMDPVLGDYARNVPDARESEVLSLFATIVNKYKATMIEDVPRIFEAVFQCTLEMIT
KNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQQLKLVMDSIMWAFRHTERNIAETGLN
LLLEMLKKFQGSEFCNQFYRTYFLATENEIFAVLTDTFHKPGFKLHVLVLQHLFCLLESG
ALTEPLWDVATSPHSYPSNAIFVREYTIKLLSASFPNMTTAEVSQFVNGLFESTNDLSTF
KTHIRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPSELQDEMVDS
NT seq 3234 nt   +upstreamnt  +downstreamnt
atggctgcggagaagctcagagatttgactcaaccgattgatgtacctttgctcgatgct
accgtcgccgccttctatggcaccggatctaagcaagagagaagtgctgctgattcgatt
ttgcgggacttgcaaaataatcctgacatgtggcttcaagttatgcatatcttgcagaat
actcaaaatttgaataccaagttctttgccttacaggttctagaaggtgtaattaaatac
agatggaatgcattacctgctgagcaacgagatgggatgaaaaatttcatctcagatatt
attgtacagctttctagcaacgaggcctcatttcgaatggagaggttgtatgtcaacaaa
ctcaacattatattagttcagattttgaagcacgagtggccagcaagatggcgaagcttc
attcctgatcttgtctcagcagctaaaactagtgaaacaatctgcgagaattgcatggct
atattgaaacttttgagtgaagaggtttttgatttttcgagaggagaaatgacacagcag
aagataaaagagcttaaacaatcattgaacagtgaatttcaactcatacatgagttatgc
ctgtatgtgctatcagcatcccaaagggccgagctcatacgcgctacactgtccacatta
catgccttcttatcatggattcccttgggttatatatttgaatcaccgttgcttgagaca
cttctaaagtttttcccggttccggcatatcggaacctaacattgcaatgtttaacagag
gtggcatcccttcaatttgggagtttttatgatgtgcagtatgtcaagatgtatggcata
ttcatgggtcaattgcagagcatactcccgcctaccacaaatatacctgaggcatatgca
aatggctctactgaagaacaatcatttatacagaacctggcactgttcttcacctcattt
tataaggttcacatccgcatcttggaatacactcaagagaatatatcaaatttgctattg
ggccttgaatatcttatcagcatttcatatgtagacgataccgaggtctttaaggtttgt
ttggactactggaattcgttggtgtcagagctgtttgagccacaccgaagtttggatact
cctgcagcttctgcaaacatgatgggacttcaggtaccggcaatgcttcctggtatggtt
gatgggcatggttctcagcttcttcaacgtcggcaactttatgctggttccatgtcaaag
ttgagaatgcttatgatatgtcgaatggctaaacctgaagaggttctcatagttgaagat
gaaaatgggaatattgtccgtgaaaccttgaaggacaatgatgttcttgttcaatataag
attatgagggagactcttatttacttgtcacatcttgaccatgatgatactgaaaagcag
atgctgaagaaattaagcaaacaactcagtggagaggattggacatggaacaatttgaac
acactctgctgggcaatcggatcaatatctggttccatgatagaagaacaggaaaacagg
tttttggtcatggtaattcgtgatttattaaatctgtgtgaaatcacgaagggaaaagat
aacaaagcagttattgcaagtaatatcatgtatgttgttggtcaatatccacggttttta
agagctcactggaagtttctgaaaactgttgttaacaagttgtttgagtttatgcatgag
acacatcctggagttcaggatatggcatgtgacacttttttgaaaatagttcagaagtgc
aagcgaaagtttgtaatcacccaggttggtgaaaatgagccatttgtatctgaacttcta
tcaggccttcccatcactattgcagatcttgaaccccatcagatacactcattctatgaa
tctgttgctcatatgattcaagcagagtctgatgcactaaagagggatgaatatattcag
cgtttgatgcagctcccaaatcagaaatggatggaaattataggtcaggcacatcaaaat
gttgagtttttgaaggatcaagatgtaatacggacggtgcttaatatattacagacaaat
acaagtgttgcatcttctttagggacatttttcctgccccagatctcaacgatcttcttg
gacatgttgaatgtgtacagaatgtacagtgagcttatttcaaaaagtatttcagaaggg
ggaccttatgcatctaaaacatcatatgtgaaacttctacgttcggttaagagggagaca
cttaaactgattgagacattcttggataaggctgaagatcaaccacagattggaaaacag
tttgtgccgccaatgatggatcctgttctgggagattatgctaggaatgttcctgatgca
agggaatcagaggttttgtccctttttgccacaatagtaaacaaatataaagctacaatg
atcgaagatgtaccccgcatatttgaagctgtttttcagtgcacactagagatgattaca
aaaaattttgaggattacccagagcaccggcttaagttcttctctctactccgagccata
gctactcattgttttcctgcactaatctgcttgtcaagtcagcaattgaagcttgttatg
gattcaatcatgtgggcatttcggcatacagaaaggaatattgctgaaacagggctgaac
ctgttgttggagatgctgaagaagtttcagggctcagagttctgtaatcagttctaccgg
acttatttcttggcaactgagaatgagatatttgctgtcttaactgatacttttcataag
cctgggttcaaattacacgtcttggtgcttcaacatttgttttgtctgctagaaagtggt
gcgctaacggagcccctttgggatgttgctacaagtccacattcatacccaagtaatgca
atttttgtacgtgaatatactataaagcttctaagtgcttcttttccgaacatgacaact
gctgaggtttcccaatttgttaatggactcttcgagtctacaaatgatctctctacattt
aaaacccatatacgagattttcttatacagtcaaaagaattttcggcacaggataacaaa
gatctctatgccgaagaggctgcagctcagagagagagagaacggcaaagaatgctttcg
attcctgggctgattgccccaagtgagttgcaagatgaaatggtggactcatag

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