Trifolium pratense (red clover): 123915920
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Entry
123915920 CDS
T08949
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
123915920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123915920
03029 Mitochondrial biogenesis [BR:
tpra03029
]
123915920
Membrane trafficking [BR:
tpra04131
]
Autophagy
Autophagosome formation proteins
ULK complex
123915920
Atg1 complex
123915920
Mitochondrial biogenesis [BR:
tpra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123915920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
123915920
NCBI-ProteinID:
XP_045823157
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All DBs
Position
LG3:complement(34290398..34297891)
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AA seq
638 aa
AA seq
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MASSNTHTEAAKTEQIIIEFFAKSLHIIIESRALSASSRNFSTLSSPSSTSSSSSSSVRP
RDKWFNLALRECPTALENADLWRHNNLQPIVVDIVLIHRTHQNLSFSPKVRSFLKDRNPF
EELGVGCSQNSQNLQNEKIIERWVIQYESRKIRDCSNSNATRRSSNTFLQNLYKKSTLLL
RSLYATVRILPAYKIFKELNSSANVSAFTLVHRISTFFEPFTTKQESEMLKFVFTPVDTN
SGRLCLSVMYRPCVSDVSSEPSTPLSPQVITDYVGSPMTDRLIRFPSLPVVRVPSHDSSP
SSLPFLRRHSWSYENGRASPPSVNYYSPSPTHSESHTLVSNASSPYCYPPSSLPPHPSEM
SLLRKKNANFDDYYPSPNFSPSPSPSSSSPIYSLESLASKTLLRSESAPVNIPNAEVANS
PGHTNRHNLPPSTPIRISRCTSEADRSRNLMQSCSTTEKLFSLGKDESHKYSGVKIAPNS
SPQVSFSRSSSRSYQDDFDETDFTCPFDVDDDDTTDPGSRAESFDRGDMTQLFEAGRFLP
IRKSQGAAVGALVHMLKKAAPLHQDFSSCENLSQGTRPETRRSNEVQEPNQILETLTPAS
IMSSGNRKTTSDALEEFHSYREMKNLLLMPRGGSKRQT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttctaatactcatactgaagctgcaaaaacagaacaaataatcatagaattc
ttcgctaaaagtcttcatattataatcgaatcaagagcactttctgcttcatcacgtaat
ttcagcaccctttcttcaccatcttcaacttcttcatcatcatcatcaagtgttcgtcct
agagataaatggttcaatctagcactcagagaatgtcctacagcactagaaaacgcagac
ctatggcgtcacaataatcttcaaccaattgtagtggatattgttttgatccatagaacc
caccaaaatcttagtttttctccaaaggttcgatcttttttaaaagatcgaaaccccttt
gaagaattaggagttgggtgttcacagaattcacagaatttacagaatgagaagattatt
gaaagatgggtgattcaatatgaaagcagaaaaattagggattgttctaattcaaatgct
actagaagatcaagtaatacttttttgcagaatttgtataagaaatctactttactttta
agatctttgtatgctactgttagaattttacctgcttataagattttcaaggaacttaat
tcatctgcaaatgtttctgcttttacacttgtgcaccgtatttcgactttttttgaacca
tttactactaaacaagaatctgaaatgctgaagtttgtgtttactcctgtggatactaat
tctggtaggctatgtttatcggtaatgtatcgtccgtgtgtttctgatgtgagttctgaa
ccttcaactcctttgtctccacaagttataactgattatgttggtagtcctatgactgat
cggttgattcggtttccgtcacttcctgttgttagggtgccatcacatgattcttctcca
tcatcattgccatttttgaggagacatagttggagttatgaaaatggtagagcctcacct
ccttcggttaattattattcgccttcgcctacacattcggaatcacatacattggtgtct
aatgctagctctccgtattgctatccgccctctagtttgcctcctcatccaagtgaaatg
tctttgcttcggaagaagaatgcgaatttcgatgattactatccttcgcccaatttctct
ccttctccctctccttcttcatcatctccaatctatagtttggagtcgttagcttcgaaa
acacttttacgctctgaaagtgctccagtaaacatacctaatgctgaagttgctaattca
cctggacataccaataggcataatttgcctccatccactcccattagaatttcgaggtgt
acttctgaggcagatagaagtaggaatcttatgcaatcttgctcaacaactgagaagctg
ttttctcttggaaaagatgagtctcacaagtattctggcgtcaagatagcacctaacagc
tcgccacaagtttcattttccaggagctctagcaggtcttatcaggatgattttgatgag
actgattttacttgtccttttgacgtggatgatgacgatacgacagatccaggcagcaga
gcggaatctttcgatcgcggtgatatgactcaactgtttgaagctggtagattccttcca
attagaaagtctcaaggtgctgctgttggtgcacttgttcatatgttgaagaaagcagca
cctctacatcaagacttctccagttgtgaaaacttgtctcagggcacgcgtcctgaaacc
cggaggagcaatgaagttcaagagcctaaccagattctagagaccctaacaccagccagt
ataatgtcttctggtaataggaaaacaacaagtgatgcattggaagagtttcatagttac
agagagatgaaaaacttgttacttatgccgcgcggtggtagtaagcgacagacatag
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