Trifolium pratense (red clover): 123915966
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Entry
123915966 CDS
T08949
Name
(RefSeq) RNA-binding NOB1-like protein
KO
K11883
RNA-binding protein NOB1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123915966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123915966
03051 Proteasome [BR:
tpra03051
]
123915966
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
123915966
Proteasome [BR:
tpra03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
123915966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
TMEM154
DZR_2
Motif
Other DBs
NCBI-GeneID:
123915966
NCBI-ProteinID:
XP_045823223
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Position
LG3:6405140..6408922
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AA seq
630 aa
AA seq
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MEEPPKASCWSNIVKKEPPPPQKPQPLLQTEQVLEDARNHHGISVAIVDANAVIAAGEKL
HGIADKFVSVPEVMEEIRDPVSRHKLSFLPFTIQTMEPTPESINKVIKFARITGDLQTLS
DVDIKLMALTYTLEAQIHGTKHLRDSPPPVQMLNVKRLPEKDMPGWGSNVPNLEEWEALE
RETEDNANSNSRILPLQDLSLNVVAQDDQSVDGSVEHTSESPLGILEGDESGGSMSRKNY
MPEKKVINIEGKTVADGIDASQGQVDENEGDWMPAVSRSTHRRFLRRKARREYYDALSST
QDQQDVEENIDGSVYEDDTASNCDVHQSDDEKHMENVVSKKDVIFAENTDGEALSATLKQ
MTLEEGSLEVLNEEQKLSLSPEELQSGNDRLLESASDGSALMDAKSCETDSVDDKASHSE
IASQTSEAADVSYADDGTSEQSWMLRSLSESTVACITGDFAMQNVLLQMGLRLLAPGGSQ
VHQLHRWILKCHACFAVTAEIGRIFCPKCGNGGTLRKVAVTVNENGVMLAARRPRVTLRG
TKFSLPLPQGGRDAMTKNVILREDQLPQRILHPKTRKKANKDDDCFLPDSVFSHHNYKGT
PFTPPVRKALAVFSGKRNPNDNHYSRSKRK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaccgccaaaagcatcatgctggagcaatatagtgaagaaagagccaccgcca
cctcaaaaaccacaaccacttttacaaaccgaacaagttttagaagatgctcgtaaccat
catgggatctccgttgccattgttgatgcaaatgccgttattgctgccggtgaaaagctt
cacggtattgctgataagtttgtctctgtaccggaagttatggaggaaattcgtgacccc
gtttctcgccataaactttcgtttcttccctttactatccaaactatggaaccaacccct
gaatctatcaacaaagttatcaaatttgctaggattactggtgatctacagactctatca
gatgtggatatcaaactcatggctctaacttatactttggaggctcagattcacggaaca
aaacatctcagggacagcccacctccggtgcaaatgctaaatgtgaagaggttacctgag
aaggacatgcctggatgggggtcaaatgttcctaatttggaagagtgggaagcattggaa
cgcgaaactgaggataatgcaaattccaattcgagaatccttcctttgcaggacttgagt
ttgaatgttgttgctcaagatgatcaatctgtagatggttcagtagagcatacgagtgaa
agtcctttgggaattctggagggtgatgaaagtggtggttcaatgagccgtaagaattat
atgcctgagaagaaagtgataaacattgaagggaagacggtggctgatggaattgatgca
tctcaaggacaagttgatgaaaatgaaggtgattggatgcctgctgtcagtcgtagtact
cacaggagatttctaagaaggaaagctagacgcgagtactatgatgcattatccagtact
caagatcaacaagatgtggaagaaaacatcgatggtagtgtttatgaagatgacacggct
tcaaactgtgatgttcatcaaagtgatgatgagaagcatatggaaaatgttgtttccaag
aaggatgtgatatttgccgagaacactgatggtgaagctctctctgcaactctgaagcaa
atgactctggaagaaggttctcttgaagttcttaatgaagaacagaaactaagtttgtct
cctgaagaattgcagtcaggcaatgatagactactggaaagtgcatcagatggtagtgca
cttatggatgctaaatcatgtgagacagattcagtcgatgacaaagcaagtcactcggag
attgcaagccagaccagtgaagctgctgatgtttcatatgcagatgatggcaccagtgag
caaagttggatgcttagatctttgtccgaatcaactgtggcctgtataaccggtgacttt
gcaatgcaaaatgttctcctccaaatgggtttgcgcttgctggcacctggaggatcacag
gtacaccaactgcacagatggatacttaagtgtcatgcctgttttgctgttactgctgaa
atcggaaggattttctgtccaaaatgtggaaatggtggcaccttaaggaaggtagctgtc
actgttaatgaaaatggagtaatgttggcagcccgtcgaccccgagttactttacgtggc
accaagttttcattgccattaccccaaggtggaagggatgcaatgacaaaaaacgttatt
ctccgtgaagatcaactacctcaaaggatacttcatcctaaaacaaggaagaaagccaac
aaggacgatgattgctttctgccggacagtgtcttcagccaccacaattataagggaact
cctttcacgcctcctgtaaggaaagcattagcagttttcagtgggaagagaaatccaaac
gacaatcactactcacgctctaagcgtaagtag
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