Trifolium pratense (red clover): 123916052
Help
Entry
123916052 CDS
T08949
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04141
Protein processing in endoplasmic reticulum
tpra04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123916052
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
123916052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tpra03110
]
123916052
04131 Membrane trafficking [BR:
tpra04131
]
123916052
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tpra04091
]
123916052
Chaperones and folding catalysts [BR:
tpra03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
123916052
Membrane trafficking [BR:
tpra04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
123916052
Autophagy
ER-phagy
Other ER-phagy associated proteins
123916052
Lectins [BR:
tpra04091
]
L-type lectins
123916052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF4834
Adeno_E3_CR2
OAD_gamma
CFAP143
FAM176
Motif
Other DBs
NCBI-GeneID:
123916052
NCBI-ProteinID:
XP_045823335
LinkDB
All DBs
Position
LG3:7102467..7107011
Genome browser
AA seq
540 aa
AA seq
DB search
MGERKRIPLGIFALLFFVISTSSLHLLHASDDIYDATFYESFDEDFDGRWIVSEKDEYNG
VWKHAANEGHEDYGLLVSEKARKYAIVKELDEPVILKDESVVLQFETRLQKGLECGGAYL
KYLRPQEAGWKPKEFDNDSPYSIMFGPDKCGATNKVHFIFKHKNPKSGAYVEHHLKFPPS
VPSDKLSHVYTAILKPDNELQILIDGEQKKKANFLSSEDFEPALIPPKTIPDPDDNKPED
WDEREKIPDPSAVKPDDWDEDAPLEIVDEEAEKPEGWLDDEPEEIDDPEATKPEDWDDEE
DGEWEAPKVTNPNCETAPGCGEWKRPMKKNPAYKGKWHAPLIENPAYKGIWKPQDIPNPA
YFELKKPDFEPIAAIGIEIWTMQDGILFDNILIAKDDKIAASYRETTWKPKFIIEKEKQR
QESDTGSSGLAIIQKKVFDLLYKFADIPFLSAYKFEIRNLIEKGESQPNLTVGILVAVVV
LIVTIFLNIIFGGKKKPARVEKKTKTPAAETSTNQGSAENEENKEEETSKGPRRRVKRDN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacgaaagcgaattcctcttggaatctttgcacttctctttttcgtcatttct
acctcttcgttacatcttctccatgcttccgatgatatctatgacgctaccttctacgaa
tcatttgatgaagattttgatggccgttggattgtttccgagaaggatgagtacaacggt
gtctggaagcatgcagcgaatgaggggcatgaagattacgggcttcttgtcagtgagaaa
gcaaggaaatatgctatagtcaaagaacttgatgagcctgtgattcttaaggatgaatca
gttgttctccagtttgagactcgcctacagaagggccttgaatgcggtggtgcatatcta
aagtatcttcgaccacaggaggccggttggaaaccgaaggaatttgacaacgattctcca
tattctataatgtttggtcctgacaagtgtggggccacaaacaaggtgcacttcattttc
aagcataagaatcctaagagtggggcgtatgttgaacaccatctcaagtttcctccatct
gttccttctgacaagctatctcacgtgtacactgctattttaaaacctgacaatgagttg
caaattttgattgacggggaacagaagaaaaaggcaaatttcttatcatctgaggatttt
gagcctgctcttatccctcccaagacaatcccagatcctgatgataataaacctgaggac
tgggacgagagagagaaaattccagacccaagtgcagtaaagccagatgactgggatgag
gatgcacccttggaaattgttgatgaagaagctgagaaacctgaaggatggttggatgat
gagcctgaggagatagatgaccctgaggctacaaaaccagaagattgggacgatgaggag
gatggtgaatgggaagccccaaaggttactaacccaaattgtgaaacagcccctggttgt
ggtgaatggaaaaggccaatgaagaagaatccagcatataagggaaaatggcatgccccc
cttattgaaaacccagcttataagggtatatggaagcctcaggacattcccaaccctgct
tactttgaacttaaaaaacctgattttgaacctattgctgctattggtattgagatttgg
acaatgcaggatggcatattgtttgacaatattttgatagctaaagatgataagattgcc
gcatcatacagggagactacatggaagcccaagtttattattgagaaagaaaaacagagg
caagaatcggatactggatcaagtggtcttgcaatcatccaaaagaaggtgtttgacctg
ttatacaagttcgcagacattcctttcctgagtgcctacaagtttgaaatacgtaatctc
attgaaaagggtgaatcgcagccgaatctcactgtcggaattcttgtagccgttgtggtt
cttatcgtgacaattttcctcaatattatattcggtgggaagaaaaagcctgcaagagtg
gagaagaagacaaaaacaccagctgcagaaacttccactaaccaaggcagtgcagagaat
gaagaaaacaaagaggaggaaacatccaagggtccacgtcggagggtaaagcgagataat
tga
DBGET
integrated database retrieval system
