Trifolium pratense (red clover): 123916111
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Entry
123916111 CDS
T08949
Name
(RefSeq) protein CHROMATIN REMODELING 24 isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123916111
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
123916111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
HDA2-3
GCOM2
Motif
Other DBs
NCBI-GeneID:
123916111
NCBI-ProteinID:
XP_045823432
LinkDB
All DBs
Position
LG3:complement(7559917..7570206)
Genome browser
AA seq
1096 aa
AA seq
DB search
MANKSVKKPQSLNDSHYRFLQDLSAPPKPSSKPLDDESDTPIQPRSLFYQDVDDDTIPQF
SAITDFDSPIDQNSPENIEPVRVEEAPVRNDVPKFSDNSSLSQHSSMENRQSRVVVEEAP
LSNKVPKFFDEYSHRQNSRENCKPVKAVEAPLSQNYAENRQPVKAVEAPLSQNYAENRQP
VKVKEAFLPKEVLQGLDNNSLKEEKNTKVKVQGRRRLCKAADKEAVKKVAVDEPKLDDLA
DFDSPIPVRKNVIEIEESKGKSQIRDILNDLTSRFDALSVEKKPQPKPVPKPVERFEGGK
EIFEDEGLEFGSAGSSFSQKQERHDTSSKDTKNDSGDIGYESDDSVQVLDHFEPENDGSI
TLSDPRSTYKLQPKIAKMLYPHQREGLKWLWSLHVRGKGGILGDDMGLGKTMQICGFLAG
LFYSRLIRRVLVVAPKTLLPHWIKELSAVGLSEKTREYFGSCAKLREYELQYILQDKGVL
LTTYDIVRNNTKSLKGHSYVEDDEDSPTWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRI
IISGTPLQNNLKELWALFNFCCPELLGDKKWFKDKYETPILRGNDKNASDRDKRVGSAIA
KELRDHIQPYFLRRLKSEVFNQDTEKTTAKLSQKREIIVWLRLTNIQRHLYEAFLKSEIV
LSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDSMLKPDEVNVAEKLAMHIADVA
ETDKFKDEHDVSCKITFIMSLLDNLIPEGHRVLIFSQTRKMLNLIQECITSKGYDFLRID
GTTKSCDRIKVVDDFQDGVGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVD
RAYRIGQKKDVIVYRLMTCGTVEEKIYRKQVYKGGLFKTVSEKKEQTRYFCQQDLKELFS
LPKEGFDVSVTQRQLAEKHDSQHIVDDSFHAHIEFLKSQGIAGVSHHSLLFSKTEPVQEA
PEHEVARVHNTHYMGTSSSSSYSREQIVDGAAFAFNPKDVNLHKKDSSPSSVGKLTELEI
KDRIYRLSQMLSNTVMISKLPDKGEKLKNRIVELNRELTKLKMEQTNVVDLDDITDEFEK
VLNVYLFIIIIYRKQC
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaagagcgtgaagaaaccacagagtctcaacgatagtcactatcgtttcctt
caagatctctccgctcctcccaaaccctcatccaaaccactcgatgacgaatccgataca
ccgattcaacctcgaagcctcttctaccaagatgttgatgacgatactattcctcagttt
tctgctatcaccgacttcgattctccaatcgatcaaaattcaccggagaatattgaacca
gttagggtagaagaagctcctgttcggaatgatgttcccaagttttccgataatagttca
cttagtcaacattcttctatggagaatcgccaatcacgtgtggtggtagaagaagctcct
ctttctaacaaggttccaaagttttttgatgaatattctcatcgtcaaaattctcgggag
aattgtaaaccagttaaggctgtagaagctcctcttagtcaaaattatgcagagaatcgc
caaccagtaaaggcagtagaagctcctcttagtcaaaattatgcagagaatcgccaacca
gttaaggtaaaagaagcttttcttccaaaggaggttctacagggtttggataataattct
cttaaggaagaaaagaataccaaggttaaggtgcaggggcgccgccgcctttgcaaagct
gcagataaagaggctgtcaaaaaggttgcagttgatgaacctaagcttgatgatcttgct
gactttgattcgcctattccggtgcggaaaaatgtgattgagattgaggaaagtaagggt
aagagtcaaattagggatattttgaatgacctaacctccaggtttgatgcgttatcggtt
gagaagaagccgcagcccaaaccggtgccaaagcctgttgagcgttttgaaggagggaaa
gaaatttttgaagatgagggtttggagtttgggagtgctggatcttcattttctcagaaa
caggagcgccatgacacctcatcaaaggatactaagaatgatagtggtgatattgggtat
gaatcagatgattcggttcaagtgttggatcactttgagcctgagaatgatggctctata
acattgagtgacccacggtctacatataagttgcagcctaagattgcaaaaatgttgtat
ccacatcagcgggaaggattaaagtggctctggtcattgcatgttcggggtaaaggtgga
attttgggagatgacatgggtttgggaaaaacaatgcagatttgtggctttctggctgga
ctgttttattcacgtttaattagaagggtattggttgtggccccaaaaacactattgcca
cattggatcaaagagttatcggctgttggtctatctgagaagacaagagaatattttgga
tcctgtgcaaaactcagagaatatgaacttcagtacatacttcaggacaaaggtgttctt
ctcaccacttatgatattgtccgcaacaataccaagtccttaaaggggcatagttatgta
gaagatgatgaagatagccccacgtgggactacatgatacttgatgagggccaccttata
aagaacccaagcactcagagagctaaaagtttgctcgagatacccagtgctcatcgcatt
atcattagtggcacgccattgcaaaataatctcaaggaattgtgggcattgttcaatttc
tgctgccctgagttgcttggtgacaaaaaatggttcaaagataaatatgaaacacctata
cttcgtggaaatgataaaaatgcttctgacagagacaagcgtgttggttcagctatagca
aaggagctaagggatcatattcagccttactttttgagacgtttaaagagtgaggttttc
aatcaagatacagaaaaaacaacagcaaagctttctcagaaacgagaaatcattgtgtgg
cttcggttgaccaatatccagcggcatctttatgaagcatttctgaagagtgagattgtt
ctctcagcatttgatggttcaccactggctgcccttacaattttgaagaaaatatgtgat
catccacttctgttgaccaagcgggcagctgaggatgtattggaagggatggactccatg
ctaaagccagatgaggttaatgttgcagagaaattggcgatgcatatagcagatgttgca
gaaacagacaagtttaaagatgagcatgatgtatcatgcaaaattactttcatcatgtca
ttgttggataatttgatccctgaagggcatagggtgcttatcttttctcagactcgcaag
atgcttaatcttattcaggaatgcataacatctaaaggttatgactttttacgaattgat
ggcacaacaaaatcctgtgacagaataaaagttgttgatgatttccaagatggtgttgga
gctccaatatttttgttgacttctcaggttggtggtttaggactgacacttacaagagca
gatcgtgttattgttgttgatcctgcttggaacccgagtactgataatcaaagtgttgac
cgagcatatcgtattggacaaaagaaagatgttattgtctatagactgatgacatgtgga
actgttgaagaaaagatctacaggaagcaggtatataaaggaggactattcaaaacagtt
tctgaaaagaaagaacaaactcgctacttttgccagcaggatcttaaggagcttttcagc
ctcccaaaagaaggatttgatgtgtctgttacccaacggcaattggctgagaaacatgat
tctcaacatatagtggatgactctttccatgcacatatagagttcttgaaaagtcagggc
atagctggtgttagtcaccacagtttactgttttccaagacagagccagttcaagaagct
cctgagcatgaagtagcaagggttcataatactcattatatgggaacttcttcgtcgtcg
tcatattcacgcgagcaaattgttgacggtgctgcatttgcttttaatcctaaggatgtt
aatttacacaaaaaagactcttctccaagtagtgttggtaaattgactgagttagaaatc
aaggatagaatttatcggctctcccaaatgctctcaaatacggtgatgatttctaaatta
cctgataaaggagagaaacttaaaaatcggattgtggagctgaatcgagagcttactaaa
ctgaagatggaacaaacaaacgtagttgatttggatgatattaccgatgaatttgaaaag
gtgttaaatgtatacctttttattattattatttataggaaacaatgttaa
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