Trifolium pratense (red clover): 123916267
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Entry
123916267 CDS
T08949
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123916267
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123916267
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123916267
Peptidases and inhibitors [BR:
tpra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123916267
Ubiquitin system [BR:
tpra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123916267
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
123916267
NCBI-ProteinID:
XP_045823646
LinkDB
All DBs
Position
LG1:39106488..39111947
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AA seq
788 aa
AA seq
DB search
MLVIGGVSWDLNWFLQFIFSALFVAIGLHTLVKNTASRYFEVDANFEGDQHHHLPPSSPS
NSMPGVPNSEGHVCAVCASRGSKQCSRCKSVRYCSTECQQSHWNSGHKEKCKNVGVLNSG
QNGTTNGGFKASAAVGKSSNLIALVPSGCGTSRPIKKPKDVLFPYDEFVKLFNWDKSGFP
PCGLLNCGNSCFANVVLQCLSFTRPLVAYLLENGHRKECTCNDWCFLCEFESHVQRARIS
PQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLDEFGGEKAIPSNLQET
TIIQHIFGGRLQSEVICTKCDKTSNQYESMMDLTVEIHGDAASLEECLDQFTVKEWLDGD
NMYKCEGCQDYVKAWKRLTVKCAPNILTIALKRFQSGRFGKLNKRVAFPETLNLSPYMSE
AGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFRGHWYRIDDSKVACVELEEVLSQGA
YMLLYRRCSARPSSLQIQTTESSGIVEQRTVEVEPSQTEQAERLSNMKALTCSGDFEVSP
SDISPELKVSSSYEYESSGIVEQRTVEVEPSQTEQAEHLSNMKALTCSRDCEVSPSDISP
ELKVSSSYEYESSVELNSEAQREQSEDTNMIDVESTDIANDISYSAVESSYLPISHAVED
LMDVDMGIPIEETSGCAQDQDDTGVATSCPSPGLPNDFSFLDKHSSVSVDYRNVEQDSEH
IDAVERNLLTANKDAYYGNGYVTVSANKSAIPHEEADTLFSGVASFPPEKDIGNGIKKVE
ISADKLIM
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttataggcggtgtatcgtgggatctgaattggttccttcaatttatattctcc
gctttgtttgttgctattggattacacactttggtcaaaaacaccgcttctagatacttc
gaagtcgacgctaatttcgaaggagatcaacatcatcatcttcctccttcttctccttcc
aattcaatgcccggcgttcctaactccgaaggccatgtttgcgctgtctgcgcttctcgt
ggctccaaacagtgttctcgttgtaaatctgttcgatactgctcaactgaatgtcaacag
tcacattggaattccgggcataaggagaaatgcaaaaatgtcggtgttttgaactcgggg
caaaatggtactactaatggtgggtttaaagcttctgctgctgtgggtaaaagctcaaat
ttgattgcgttggtacctagtggttgtggtacttccaggccaatcaagaagcctaaagat
gttctttttccttatgatgaatttgttaaactatttaactgggacaaatcaggatttcct
ccctgtggactattgaattgtggaaacagttgctttgcgaatgtggttcttcagtgtctt
tcattcacaaggccacttgttgcctacttgttggagaacggccatcggaaagaatgcact
tgtaatgattggtgctttctatgtgaatttgaaagtcatgttcaacgagcaaggataagt
ccacaggcgttttctccaatgaatattctctctcgtttgcctaatatcggcgggacttta
ggttatggaagacaagaggatgctcacgaattcatgaggttttcaattgatactatgcaa
tctgtttgccttgatgaatttggtggtgaaaaagccatcccttctaaccttcaggaaaca
accattatccaacacatttttggtggccgccttcaatctgaggttatttgcacaaagtgt
gataagacttcaaatcagtatgaaagtatgatggacttgactgtcgaaattcacggagat
gctgcctcgttggaggaatgtctagatcagtttactgtcaaagagtggcttgatggggac
aatatgtataaatgtgaggggtgtcaggactatgtaaaggcatggaaacgtcttactgtg
aaatgtgctccaaatattcttacaattgccttgaaaagatttcagagtgggaggtttgga
aaacttaacaagagagtagcctttccagagactttaaatcttagcccttacatgagtgaa
gctggagatggatctgacatctataagttatatgctgttgtagtccatattgatatgtta
aatgcttcattttttggtcattacatctgttacatcaaggatttccggggacactggtat
aggattgatgactcaaaggttgcttgtgtggaattggaggaggtactttctcagggagca
tacatgctgttgtatagaaggtgtagtgcccggccatcaagccttcaaattcaaactacc
gaatcttctgggatagtagaacagcgaactgtggaagtggaacctagccaaactgaacaa
gctgaacgcctctcaaatatgaaggctttgacttgcagtggagattttgaggtttcacca
tctgatattagcccagaattgaaggtttcttccagctacgaatatgagtcttctgggata
gtagaacagcgaactgtggaagtggaacctagccaaactgaacaagctgaacacctctca
aatatgaaggctttgacttgcagtagagattgtgaggtttcaccatctgatattagccca
gaattgaaggtttcttccagctacgaatacgagtcttctgttgaattgaactcagaagct
caaagagagcagtctgaggacacaaacatgattgatgttgagtcaactgatattgctaac
gatatttcttatagtgctgttgaatcatcttatttgcccatttctcatgctgtcgaagat
ttgatggatgtagatatgggaatacctatagaagagacttcaggctgtgctcaagatcaa
gatgatactggtgtggctacatcttgtccttctccaggtttaccaaatgatttttctttc
ttggataagcattcttctgtttcagtggactatcgaaatgtggagcaagattcagaacat
atagatgcggttgaacgcaatttgttaacagctaacaaagatgcatattatggcaatgga
tatgttactgttagtgcaaataaatctgctattccacatgaagaggctgataccctattt
tctggtgttgcttcatttcccccagaaaaggacataggaaatggaataaagaaagtggaa
atatcggcggataagttaataatgtag
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