Trifolium pratense (red clover): 123916559
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Entry
123916559 CDS
T08949
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123916559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123916559
Spliceosome [BR:
tpra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
123916559
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
123916559
NCBI-ProteinID:
XP_045823994
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Position
LG3:27068918..27074014
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AA seq
540 aa
AA seq
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MTSKREMVTGDRVEEEGVDLELKRQRVDENSSPSSPPVSIANPLSGLANYYADIDEEEDY
YQRDKSTVSDNRNGGSQQNGHKYEGDDDSDEEDDSHEELLTGRNCRQVEVRRDCPYLDTV
NRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKRSHAYTHSLEAGHHVYINLLTEK
VYCLPDGYEINDPSLDDIRHVLNPRFTAKDVEQLDKNKQWSRALDGSSYLPGMVGLNNIK
ETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHE
FLQAVMKASKKRFRIGAQSDPVEFVSWLLNTLHADLKTIKKNMSIIYECFQGELEVIKEI
ASNKETSNMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHIAR
MQYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENQKLRSK
YDLIANIVHDGKPGEGSYRAFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQQQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgacatctaaaagggaaatggtaactggtgatagagtagaggaggaaggggttgatttg
gaattgaaaaggcaaagagtggatgagaactcttctccctcttctcctcctgtctcaatt
gcaaatccgctttctgggttggctaattactatgctgacatcgatgaggaggaagattat
tatcaaagggataagagcactgttagcgacaataggaatggtgggtctcagcagaatggg
cataaatatgaaggggatgatgacagtgatgaagaagacgattcacatgaagaactattg
actggaagaaattgtcgccaggtggaggttcggagggactgcccataccttgatactgtt
aatagacaggttttggattttgactttgagaagttctgttctgtctctttgtcaaattta
aatgtgtatgcatgtttggtttgtggtaagtactaccaaggtagagggaaaaggtctcat
gcctatacgcatagtctggaagccggacaccatgtttatatcaatctccttaccgaaaag
gtctactgtcttcctgatggctatgaaattaatgatccttcattagatgacattcggcat
gtcctgaacccaaggtttactgcaaaagatgttgaacaactagataaaaataagcaatgg
tccagggcacttgatggttctagttaccttccaggaatggttggacttaataatattaag
gagacagattttgtgaatgtaacaattcaatccttaatgagagttaccccgttgaggaat
ttttttcttatccctgaaaactatcaacactgcaaatctccacttgttcatcgatttggt
gaactcactaggaagatctggcatgcgcgaaactttaaaggacaggtcagccctcatgaa
tttcttcaagcagtgatgaaagctagtaaaaaacggtttcgtataggtgcgcagtctgac
ccagttgagttcgtgtcatggcttcttaatacgctgcatgctgatcttaaaactataaag
aagaatatgagcataatttatgagtgttttcagggtgaacttgaggttattaaagagatt
gcatccaacaaagaaacttcaaatatgccatttctaatgctggggttggacttgccacca
cctcctcttttcaaggatgtgatggagaaaaatataattcctcaggttccactctttaac
atactaaagaagtttgatggtgagactgtcacagaggtggttcgtcctcatatagcaaga
atgcagtatcgtgttaccagattgcctaagtatatgattcttcatatgcgacgatttact
aagaacaacttttttgtggaaaagaatcctactttagtcaactttcctgtgaagaatctg
gagttgaaggattacattcccttgccaacaccaaaagaaaaccagaaattgcgctctaaa
tatgatttgattgcaaacattgttcatgatggcaaacctggtgaaggttcctatagggcg
tttgtgcaacgaaaatcagaagaactatggtatgagatgcaggatttgcacgtgtcagaa
acactccctcatttggttgcgctttcagaaacttacatgcaaatatatgagcagcagcag
tga
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