Trifolium pratense (red clover): 123916599
Help
Entry
123916599 CDS
T08949
Name
(RefSeq) myosin-15-like isoform X1
KO
K10357
myosin V
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
123916599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123916599
04131 Membrane trafficking [BR:
tpra04131
]
123916599
03029 Mitochondrial biogenesis [BR:
tpra03029
]
123916599
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpra04812
]
123916599
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
123916599
mRNA cycle factors
P-body specific factors
123916599
Membrane trafficking [BR:
tpra04131
]
Others
Actin-binding proteins
Myosins
123916599
Mitochondrial biogenesis [BR:
tpra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
123916599
Cytoskeleton proteins [BR:
tpra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
123916599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Flp1_like
Zeta_toxin
AAA_22
AAA_16
Myosin_VII_N
AAA_lid_6
Motif
Other DBs
NCBI-GeneID:
123916599
NCBI-ProteinID:
XP_045824056
LinkDB
All DBs
Position
LG1:39435366..39455852
Genome browser
AA seq
1524 aa
AA seq
DB search
MNVRKGSTVWVPDKDLAWIPAEVIDSDDKFVQIVTDSGNTVFVSAEKLCPRDADEDELGG
FEDMTRLTYLNEPGVLYNIRRRYALNDIYTYTGSILIAVNPFTKLPHLYDSYMMEQYKGA
PLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRTGGD
DRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDRNGRISGAAIRTYLLERSR
VVQIKDPERNYHCFYQLCASERDAEEYKLGHPSHFHYLNQSKIYELNGVSNAEEYMRTRR
AMDIVGISHGDQEAIFRVLAAILHLGNVEFSPGKEHDSSAIKDEKSRFHMQMAADLFRCD
VDLLLATLCTRSIHTREGNIIKALDCNAAVAGRDALAKTVYARLFDWLVDKINRSVGQDI
NSPMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYI
EFVDNQDVLDLIEKKPIGVIALLDEACMFPKSTHETFSTKLFQHFRSHPRLEKEKFSQTD
FIVSHYAGKVTYHTDTFLDKNRDYVVVEHCNLFSSSNCPFVSGLFPPLPEESSRSSYKFS
SVATRFKQQLQSLMETLKSTEPHYIRCVKPNSLNQPQMFENASIIHQLRCGGVLEAIRIS
LAGYPTRRTYSEFVDRYGLIGPEILDGSYYDDKAATEKILHKLKLDNFQLGRTKVFLRAG
QIGVLDSKRAEVLDKAAKCIQCQLRTFITRRHFISVRAAAVSLQACCRGYIAQKMYAAKR
ETAAAIAVQKYIRMWLTRHAHMKLYSSAIIIQSHVRGFITQQRFLHGKEHRAAISVQACW
RMYKVRSAFQRYLASVVAIQCLWRCRQAKREFRRLKQEANEAGALRLAKTKLEKQMEELT
WRLHLEKKIRVSNEEVKQRENSTLRKMLEALNLELDAAKLATINECNKNAVLQNQLELSA
KEKSALKRELVSVDELRKENAMLKFALDSFEKKYTSLEHEFINAQKGQDETIEKLRGFEQ
KCSRLEQNVKSLEEKLLSLEDENHVLRQKTLSAPRKSNRPSFAKSFSEKYSTPIVSRTER
KPVFETPTPTKSTATFTLGMSDSHRSKSTAERHQDNYEFLSRCIKENLGFKNGKPIAARI
IYKCLLHWHAFESERTAIFDNIIEGINDALKVREDDIVLPYWLSNTSALLCLLQRNLRSN
GFLATNGQRYTGSSGLTSRTGHGPKSPLKFIGYDDGMSHVDARYPAILFKQQLTACVEKI
FGLLRDNLKKELSPLLQLCIQTPKTGRGHGGKSSRSPVGLSQQSSGSQWSNIVKFLESLM
SKLRGNHVPSFFIRKLVTQVFHFINITLFNSLLLRRECCTFSNGEYMKSGLAELEKWIAN
AKEMYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDK
YGTQSVSNEVVSVMREIVNKDNQNMPSNSFLLDDDLSIPFSAEDVDKAIPPIDLDEIDLP
VFVSEYSCAQFLNSHQSRLVVAEA
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtacgcaagggttcaacagtttgggttccagataaggatttagcttggatacct
gctgaagtaatcgattctgatgataaatttgttcagattgtaactgattctggcaacacg
gtttttgtttcggcggagaaattgtgtccgagagatgcggatgaagatgagctcggtgga
tttgaagatatgacgagattgacttatttgaatgaaccaggagtgttgtataatattcga
aggagatatgcgcttaatgatatttatacatatacagggagcattttaatagccgttaat
cccttcacaaagcttcctcatttgtatgatagttatatgatggagcagtataagggagct
ccgttgggtgagcttagcccacatgtttttgctgttgcagatgcgtcttatagagcaatg
atgaatgaaggtaaaagtcaatctatcttggtaagcggtgaaagtggcgccggcaaaact
gagacaacaaaattgatcatgcaatatcttacttttgttggtggccgtaccggtggtgat
gatagaacagttgaacaacaagttcttgaatcaaatccacttttagaggcatttggcaat
gcaaggactgttaggaatgacaattcaagtcgttttgggaagtttgttgaaattcagttt
gatagaaatggtagaatatctggtgctgcaatcagaacttacttattagaaagatcacga
gttgtgcagataaaggatcccgaaagaaattatcactgcttctatcagttgtgcgcctct
gaaagggatgcagaggagtataagttaggacatccaagtcatttccactatttaaatcaa
agtaaaatctatgaactaaacggtgtaagcaatgctgaagaatacatgaggacgaggagg
gcaatggatattgtcggcatcagtcacggggatcaggaagccatatttcgtgtcttagct
gcaattttgcacttgggaaatgttgaattttctcctggaaaagagcatgactcatcagca
ataaaggatgaaaaatcaagatttcatatgcagatggctgccgatcttttcaggtgtgat
gtagacctactgctggcaacattgtgtactcgatcaatacacactcgagaaggaaatatt
atcaaggcccttgattgtaatgctgctgttgctggtcgggatgctttggcaaaaactgtt
tatgctcgtttatttgattggcttgttgataagatcaataggtctgttggacaagatatc
aattccccgatgcaaattggagtcttggatatttatggttttgagtgctttaaggataat
agttttgagcaattctgtatcaattttgcaaatgaaaagcttcagcaacattttaacgag
catgtattcaagatggagcaagaggagtatggtaaagaagaaattaactggagttacatt
gaatttgtggacaaccaagatgttctagacttgatcgaaaagaaacccattggtgtcatt
gctctgttggatgaagcttgcatgtttccaaaatcaacacatgaaacattctctactaag
ttgtttcagcatttccggtctcaccctaggttggaaaaggaaaagttttcacaaacagat
tttatagtttctcattatgctggaaaggtcacttatcatacagatacctttttggacaaa
aatcgtgactatgttgttgtagaacattgtaatttattttcttcttcaaattgccctttt
gtgtctggtcttttccctccactaccagaggaatcttcaagatcatcatacaagttttct
tcggtggctaccagatttaagcaacaactgcaatcactcatggagaccctcaagtcaaca
gagcctcattacatacgatgtgtgaagccaaattcattgaatcaaccacaaatgtttgag
aatgcgagcatcatacaccaattacgctgtgggggcgtccttgaagctattcggatcagt
ctggcaggttatcccacccgaagaacatattcagagtttgtagatcgctatggattaata
ggccctgagattttggatggaagttattatgatgataaagctgcaactgagaaaatttta
cataagctcaagcttgataattttcagttgggcaggaccaaagtatttctcagggctggc
caaattggtgttttggactccaaacgtgctgaggttttggacaaggcggctaagtgtatt
cagtgccaactgaggacatttattacacgcaggcatttcatttcagtaagagcagctgca
gtgtctcttcaggcatgctgcaggggatacattgcccagaagatgtatgcagctaaaagg
gaaacagcagcagctattgctgtgcaaaagtatatacgtatgtggctaacaaggcatgca
cacatgaaattatattcttctgctattatcatacaatcgcatgttcgaggtttcattact
caacaaagattcttgcatggaaaagaacatagagccgctatatctgttcaggcctgttgg
aggatgtacaaggttaggtcagctttccagcgatatcttgcttcagttgtggcaatacag
tgtctatggcggtgtagacaagcaaaaagggagtttcgtagacttaaacaagaggctaat
gaagctggtgccctccgtctggctaaaactaaacttgagaagcaaatggaagagctcaca
tggcgtttgcacctagaaaagaaaataagggtttctaatgaagaggtcaaacaaagagag
aactctacacttcgaaaaatgttagaagctctgaatcttgaattagatgcggccaaattg
gctacaattaatgagtgcaacaagaatgctgttctgcaaaatcaattggaattgtcagcc
aaggaaaaatctgctttaaagagagagctagtttctgtagatgaattacgaaaggaaaat
gctatgctaaagtttgcactggattcctttgagaaaaagtacacatctttagagcatgaa
tttataaatgctcaaaaaggccaagacgaaaccattgagaaactgaggggatttgaacag
aaatgctctcggctcgagcaaaatgtgaaaagccttgaagaaaagctattgagtttggag
gatgaaaatcacgtgcttcgtcagaaaaccttaagtgctcctcgaaagagtaaccgcccg
agttttgcaaagtcgttttcagaaaaatactcaactccaatagtctcccgcactgagcga
aagcccgtattcgagacacccacacccacaaaaagtactgctacttttacgctaggcatg
tcagactctcatcgatctaagtcgacagcagagaggcaccaggacaattatgaattcctc
tctaggtgtatcaaagagaatttgggattcaaaaatggtaaacctattgcagctcgtatc
atatacaaatgtcttcttcactggcatgcttttgaatctgagcggacagccatttttgat
aacattattgaaggcataaatgacgctctaaaggttagggaagatgacatagtcttgcca
tattggctgtccaatacttctgctcttctatgcctcttacagaggaacttacgttcaaat
ggctttttagctacaaatggtcaacgttatactggatcgtctggcttgaccagcagaact
ggccatggaccaaaatccccattgaagtttattggatatgatgatggtatgtctcatgtg
gatgcaagatatccagctatacttttcaagcaacaactaactgcatgtgttgagaaaatt
tttgggcttctacgtgataatttgaagaaagaactttcaccacttctgcaactatgtatt
cagacacccaaaacaggaagagggcatggtggaaaatcatctagatctcctgttggcctt
tctcaacaatcatctggtagtcaatggagcaacattgtcaaatttttggaatcactcatg
agcaaacttcgtggaaatcatgtgccatccttcttcattcgtaaactagttacgcaagtt
tttcacttcatcaatattacactcttcaacagtcttcttttacgtcgtgaatgttgcaca
ttctccaatggtgaatatatgaaatctggtctcgcagagctggagaaatggatagccaat
gcaaaggagatgtatgcaggaacatcttggcatgagttgaattatataaggcaagctgtt
gggttcttggtaatacatcagaagaggaaaaaatcattggaagagattcgacaggatctt
tgtccggcattgactgtcaggcaaatctatcgaataagtactatgtactgggatgacaag
tatggaacgcagagtgtgtccaatgaggtagttagtgtaatgagggaaattgttaacaag
gacaatcagaatatgccctctaattctttcctattggatgatgatctgagcattcctttc
tctgccgaagatgtagataaggcaatccctcctatagatctggacgagattgatctccca
gtattcgtgtcagaatattcttgtgcccagtttcttaattcacatcaaagtagattggtc
gttgctgaagcttga
DBGET
integrated database retrieval system
