Trifolium pratense (red clover): 123916775
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Entry
123916775 CDS
T08949
Name
(RefSeq) minichromosome loss protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123916775
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
123916775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Ctf4_C
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD_LRWD1
Beta-prop_Vps41
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
eIF2A
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_SCAP
Histone_HNS_N
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
123916775
NCBI-ProteinID:
XP_045824261
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All DBs
Position
LG3:complement(30336812..30342357)
Genome browser
AA seq
1014 aa
AA seq
DB search
MVIQNKASLTPFPPPAKLLKPKTSFGALNASLLLQLQIHFPHTHSKSILQFYSTVSEKQT
IMKVRSVKMREAHTQKGGRASFCSVLWDQQAQHLVTSSSSDVSVSIHNPLLPSAAPKILR
HHRDGVTALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKKGSML
AAAGDDEGIKLINTVDGSIARVLKGHKGQVTGLAFDPNGEYLASLDSNGTVIIWELQSGK
NLHNLKGIAPDTGLDVSTMNVLCWSPDGETLAIPGLRNDVVMYDRDTAEKLFSLRGDHNQ
PICFLCWSPNGKYMATSGLDKQILIWDVDRKQDIDRQKFDEIVCCMAWKPIGNALTVIDV
MGKYGIWDNVIPSSMKSPTEDIPMQGKNNKGLLLYDEEDQNNGFSESLSDLGENSNGEFE
PPTSRKRLRKHSLSEENFDEDGDDGIDLYPKIESHKKRNRSAKENLDNGNVGFRSTILPK
TKMQEAFQPGATPVQPGKRRFLCYNMLGSITTVDHDGYSHIEIDFHDTGSSPRVPSMTDH
FGFTMAALNENGSVFANPCKGEKNMSTLMYRPFSSWASNSEWSMRFEGEEVKVVALGASW
VAAVTSFNYLRIFTEGGMQRHVISLDGLVVTASGFKDKLAVVTHATDCLSSNDQVLEFKL
FNITHGTQPLRGRLPITPGSSLSWFGFSEEGQLCSYDSKGVLRLYTSQFGGSWFPVFSAF
KEKTDENYWMVGLQTNKLVCVVCKKPEFFPQVVPKPILTLMNLAFPLATSDLGSEALENE
FMMNSMHLFEIQKKMEEMDNAGLDASLLDDDAFNLEAAQDRCILRLIASCCNSDKLVRAT
ELVKLLSLEKSMKGAIKLVTALKLPNLAEKFNGILEERLYNEVKKTKETNLKENSFAPVT
SDTLPSGSKAETSKASIISSSPNLSAPLFTKKNKTQEAAKDGTNKTAEVDGSMKAKQTGG
DETSDKKGKEEVQAPPHPHGSSIKLTNKHGTNKSEPSLVTPTRPSNPFLKSAIK
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggtcatccaaaacaaagcatcactcactccatttccacctcccgccaaactcctgaaa
ccaaaaacctcatttggcgccttaaacgcttccctacttctccaacttcagatccatttt
cctcacacccactccaaatcaatccttcaattttattcaaccgtttcggaaaaacaaacc
attatgaaggtccggtcagtgaaaatgagggaggctcacactcaaaagggcggccgtgct
tccttctgctcagtcctatgggaccagcaagcccaacatctggtaacttcctcttcttcc
gatgtgtctgtctcgattcataaccctcttcttccctccgccgcccctaaaatcctccgt
caccaccgtgatggtgttactgctttggctcttagccctaattccacttgtcttgcttct
ggatctgtcgatcactccgttaaactctacaaatttccaggtggagagtttgagacaaat
ataacgaggttcacacttccgatacgttccctagcatttaacaagaaaggaagcatgtta
gcagctgcaggtgatgacgagggcatcaagctcataaacacagttgatggctctattgcg
agggttctgaaagggcacaaaggacaggtcaccggcttagcttttgaccctaatggtgaa
tacttagcatctctggactcaaatggaaccgttatcatatgggaactgcagtcagggaaa
aaccttcacaacctcaaaggcatcgctcctgacactgggttagatgtttcaaccatgaat
gttctttgttggagtcccgatggtgagactttagccattcccgggttgagaaatgatgtc
gtaatgtatgatagggacacggctgagaagttgttctctctgagaggagatcataaccag
cctatatgttttttgtgttggtcaccgaatggcaagtacatggctacttcgggattagat
aaacagattctgatatgggatgttgataggaagcaggatattgacagacagaagtttgat
gaaatagtgtgttgcatggcatggaagccaattgggaatgcgttgactgttattgatgtt
atgggaaaatacggcatatgggacaatgttattccttcgtctatgaagtccccaacggag
gatatccctatgcagggcaagaacaataaagggcttcttttgtatgacgaggaagatcag
aacaatggttttagtgagagcttgagtgatcttggtgaaaatagtaacggggagtttgag
ccaccaactagcaggaaaagattgcgcaagcattccttgagcgaggaaaattttgacgag
gatggagacgatggaattgatctatatccaaaaattgagtctcacaagaaaaggaaccgg
tcagccaaggagaatttggataatggcaatgtgggatttagaagcacaattttacccaag
acaaaaatgcaggaggcatttcaaccaggagccacgccagtgcagcctggaaaaaggcgc
ttcttatgctacaatatgcttggaagtataaccactgtcgatcacgatgggtactctcat
attgagattgattttcatgatactggaagtagtcctcgagttccatcaatgactgaccat
tttggatttacaatggctgcattgaatgagaatggaagtgtctttgcaaatccttgcaag
ggggagaagaacatgagcacactcatgtatcgcccatttagtagctgggctagtaatagt
gagtggtctatgcgctttgaaggcgaagaagtaaaggttgttgcacttggtgcttcttgg
gtggctgcagtaactagttttaattaccttcggatctttactgagggtggtatgcagaga
catgtaatttcgctagacgggctagtggtgactgcatcgggtttcaaggataagcttgca
gttgtcactcatgctactgattgcctttcctcaaacgatcaggtgttagagtttaagtta
tttaatataacacatgggactcaaccccttcgcggtcgcttgccaataactcctggttcc
tctctaagttggtttgggtttagtgaagagggccaattgtgttcttatgattccaagggt
gtgctaagattatatacaagccaatttggtggtagctggtttccagtcttcagtgctttt
aaagagaagacagatgaaaactattggatggtgggtttgcaaacaaacaagttagtttgt
gtagtatgcaaaaagcctgaattcttcccacaggtggtgcctaaaccaattcttacttta
atgaatcttgcgtttccactcgctacttctgatttgggatctgaagcccttgaaaacgag
tttatgatgaacagcatgcatctctttgagattcagaaaaaaatggaagaaatggataat
gctggtttggatgccagcttacttgatgatgatgctttcaatttggaagctgcacaagat
agatgcatactaagacttatagcatcctgctgcaatagtgataaacttgtgagagctact
gaacttgtgaagcttttgtcactggagaaatcaatgaaaggtgcaataaaacttgttact
gctctgaagcttccaaatttggccgaaaaattcaatggcatattggaggaaaggctatat
aatgaagttaaaaagactaaagaaaccaacctcaaggaaaacagttttgcacccgttaca
tcggatactctacctagcggtagcaaggccgaaacatcaaaagcatctatcatttcatca
tcaccaaatttatctgcaccgttgttcacaaagaaaaataaaacacaagaagcagctaaa
gatggaacgaataaaactgcagaggtggatggaagtatgaaagcaaagcagacaggaggg
gatgaaacaagtgacaagaagggtaaggaggaagtgcaagctcctcctcatccacatggt
tcgtcgataaagttgacaaataagcatggcactaacaaatcagaacctagtttggtgaca
ccaacaagaccttccaatccatttttgaagtctgcaataaaatga
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