Trifolium pratense (red clover): 123916857
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Entry
123916857 CDS
T08949
Name
(RefSeq) RINT1-like protein MAG2L isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123916857
Membrane trafficking [BR:
tpra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
123916857
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
PHB_depo_C
HD_4
Motif
Other DBs
NCBI-GeneID:
123916857
NCBI-ProteinID:
XP_045824381
LinkDB
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Position
LG3:48702976..48708042
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AA seq
822 aa
AA seq
DB search
MESLPNMNDLTKKHIDIDFLNQHFTTKQDLFIESTQFLISSSLTKHCSQLHSFLLNNLTK
RTVSWISRSFKSNSSFQQLSLSLQNLSLLTSPHGVGSKRFRWVLSEELPRLAEELNRVES
IRSYLQNAVQLEALVGDLEDAALFVMASHTRAGNMFSSKLSISSISNDNNEQKHDNLIQA
IKAMNDIEQVLVTIVKFHPQWQCLLRSVDVRVDKILAALRPQIFADHRALLASFGWPPKL
LQSENSREQITNLPNPLVLMQEDKRRNYSRSFIVLCALQHLQDKREERQLKMKRETQNLR
LWAIDELVSPIASRMEHHFGKWTEQPEYIFALAYKVTRGFITGVDDVLQPLIDKAGLISC
SAKEAWVDAIVQMLSGFLAKKVFSSLAESYNVKHLKPDVLSSWLHLIDHIIAFDKKMQSL
VNQDTCFLAESGNFEGPSRGMSVLSIFCDRHDWLKMWAKLEFKNAWEKLNSELKDEKTWV
VSSKCNNGIDTDQEHLLSTIEDHKAPPIAELFLKINWEMIKRCQTMPSILSRAKFIRSAA
GRFIWYFFKILLLRFKSTELSPHNSDDVAIVRVCGLINAARYISIKLQEWNDAVEFLEMK
IAEKDSSKKTQDDTVASDCFFYEEIKSLFEMETNWLVEIIAVILRQFEILSWEYVQNKDN
FEEKQDYTNLVVASEAISLVVSNDFVGALDALKGWLGIVKINLNRKDFLDLWRSIAEGLD
HYISSSILTSEIRFSKIGTSQFDADMQALIYIFKPYCARPHAFFPYINEIIKLLKLKKEE
ANQIQGLLSIDESGPKCLHLHGISHLSVNQVNKVLRYRNCAT
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggagtctttaccaaacatgaatgacctaacaaaaaaacacatagacatagattttcta
aatcaacactttacaaccaaacaagacctttttattgaatccactcaatttctcatctct
tcttcactcaccaaacactgttctcaacttcactcttttctccttaacaacctcactaaa
cgcaccgtttcatggatttctcgttccttcaaatccaattcctctttccaacaactctcc
ctctccctccaaaatctctccctcctcacttctccccatggagttggttccaagagattt
cggtgggttttgagtgaggagcttccgcgattagccgaagaattgaatcgagttgagtct
attcggagctatcttcagaatgctgtacagttggaagctttggttggagatcttgaagat
gctgctctctttgtcatggctagtcacactcgtgcaggcaatatgttttcatcaaagctc
tcgatatcatcaatttccaatgataataatgaacagaagcatgacaacttgattcaggct
ataaaagccatgaatgacattgaacaagtattggtcactattgtgaaattccatcctcag
tggcagtgtcttctgaggtctgttgatgttagagtagataaaatcttggctgctctccga
ccacaaatttttgcagatcatcgggctcttcttgcctcttttgggtggccaccaaaactg
ctgcagtcagaaaacagtcgcgagcaaatcacaaaccttcctaatccattagttctaatg
caagaagataaaagaagaaattactctcgaagttttatagttctttgtgctttacagcat
ctgcaagataaaagagaagagagacagcttaagatgaaaagagagacacagaatttacgg
ctttgggctattgatgaactagtctctcctattgcatcaaggatggaacaccattttgga
aaatggacggaacagccagaatatatcttcgcgctggcatataaagttacgcggggtttt
attacaggagtagacgatgtcttgcagcctcttattgataaggcggggctgatcagttgt
agtgcaaaggaggcatgggtcgatgcaatagttcaaatgctttctggctttcttgcaaag
aaagttttctcttcgcttgccgaaagttacaacgtaaaacatttaaaaccggatgtatta
tcttcatggcttcacctcatagaccatatcattgcttttgacaaaaagatgcaatctctt
gtcaatcaagacacttgtttcttggcggagtccggaaattttgaagggccctcaagaggt
atgtcagttttatcaatattctgtgataggcatgattggctgaagatgtgggcaaaatta
gaattcaaaaatgcgtgggagaaacttaattcagagttgaaagatgagaaaacatgggtg
gtttctagcaaatgtaataatgggattgacactgatcaggaacatctgttatctactata
gaagatcacaaagctccacctattgcagagctattccttaaaatcaattgggaaatgatt
aaacgctgccaaactatgccatccattttgtcgcgtgcaaagtttattagatctgcagca
ggaagattcatctggtatttctttaagatattgcttttgcggttcaagtcaactgaatta
tctcctcataattctgatgatgttgccatagttagagtgtgcgggttaataaatgctgcc
aggtatatttcgattaaactgcaagaatggaatgatgctgtggagtttctggagatgaaa
attgctgaaaaagattctagcaagaaaacgcaagatgatacagtggctagtgactgcttt
ttttatgaagaaataaaaagcttgtttgaaatggaaaccaactggcttgtggaaattatt
gcggttattcttcgacaatttgaaatactttcttgggaatatgttcaaaacaaagataac
tttgaggaaaaacaagattatacaaatctagttgttgcaagcgaggcaattagtttagtt
gtctccaatgattttgtcggggctttagatgctttaaaaggttggctcggtattgtgaag
ataaatctcaacagaaaggacttcttagatttatggagaagcattgccgaaggactggat
cattacatttcaagcagcattttaacaagtgagattcggttttccaagattggtacaagt
caatttgatgctgatatgcaagctttgatatatattttcaagccttattgtgctcgcccg
catgcgtttttcccttatattaatgagattattaagcttttgaagctgaaaaaagaagag
gcaaatcaaattcaaggtttactatccattgatgaaagtggacctaaatgtttacatctt
catggaatttctcatctatcggttaatcaagttaataaagttcttagatacagaaattgt
gccacttga
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