Trifolium pratense (red clover): 123917274
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Entry
123917274 CDS
T08949
Name
(RefSeq) membrin-11-like
KO
K08496
golgi SNAP receptor complex member 2
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
123917274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123917274
Membrane trafficking [BR:
tpra04131
]
SNARE
SNAP-25[N] (Qb)
Bos1 / Membrin
123917274
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
TMCO5
DUF6827
AAA_13
SpoVR
DUF7018
ANC1_spectrin
EXOC6_Sec15_N
Spectrin
BLOC1S3
Phage_GP20
Motif
Other DBs
NCBI-GeneID:
123917274
NCBI-ProteinID:
XP_045824903
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Position
LG3:47920655..47924551
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AA seq
224 aa
AA seq
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MEGGGTLSEVHQSAKKLLLKCSDDVARLERLEHSTSTSAAIDSDLSFAVKKDINQIQSLC
VEMDRLWRSVASKPQRDLWKRKVEQIAEEAESLKQSLDKYNSRIQKRTREANDRAELLRR
VNGGSDHVLRIFDDDAQAMHSVRNSARELENANALGEAILSSIHGQRERLKSAQRKALDV
LNTVGISNRVLRLIERRNRVDQWIKYAGMLLTVVFVLAIVLWRR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggaggaacactctcggaagttcaccaaagtgcgaaaaagctattgctcaag
tgcagcgacgatgttgcacgtctcgagcgcctcgaacattccacctctacctccgctgcc
atcgattcggatctttcgttcgccgtcaagaaagatatcaaccagatccaatccctctgt
gttgagatggaccgtctttggcgttctgttgcatccaaacctcaacgtgatctctggaaa
agaaaggtcgaacaaattgctgaagaagctgaatcactgaaacaaagtttggataaatat
aactcaaggattcaaaagcggactagagaagctaatgacagagcagaactgctgagacga
gtgaatgggggttctgatcacgttttgagaattttcgatgacgatgcacaagcaatgcat
tcagttcgcaattctgccagggagcttgaaaatgctaatgcacttggggaggccattctt
tcttcaatacatggccaaagggaacgcttgaagagtgcacagcgaaaggcgttggacgtt
ctcaatacagtggggatatcaaacagagtcctgagattaattgagagacgaaaccgtgtt
gaccaatggatcaaatatgcaggaatgctattgacagttgtttttgtgcttgccattgtt
ttgtggagacgttga
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