Trifolium pratense (red clover): 123917293
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Entry
123917293 CDS
T08949
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 9, mitochondrial-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123917293
03036 Chromosome and associated proteins [BR:
tpra03036
]
123917293
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123917293
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Helicases
123917293
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
123917293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
ERCC3_RAD25_C
AAA_30
YIEGIA_cap
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123917293
NCBI-ProteinID:
XP_045824936
LinkDB
All DBs
Position
LG3:complement(48049703..48055574)
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AA seq
565 aa
AA seq
DB search
MTSTILKRSSSIFSRRFFAAITSVELLPIRHRSTFALSSAVYGKGDRLFHAKSEPLNFHS
SSLVSRGAQLAVDYDDVQHDEGFSGSGDEGLEIAKLGISKEIVNALAKKGIAKLFPIQRA
VLEPAMQGRDMIARARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPMAMVLAPTRELARQ
VEKEFNEAAPNLETVCLYGGMPIQQQIHQLGGGVDIVVGTPGRVIDLLKRGSLKLKDVSY
VVLDEADQMLQVGFQEAVEIILQKLPSKRQTVMFSATMPSWIKNISRNYLNKPLTIDLVG
DSDQKLADGISLYSIASNAYSKAGILAPLIKEHAKGGKCIVFTQTKRDADRLSHIMSKTL
KCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFV
HRSGRTGRAGKKGTAILVHTENQSRAVKTIERDVGCTFKELPKITVESGSADMFGSMSGD
RYGSLGGRDRRSGGTGFGGSSGSGRTGYGKSSGFGGSGSSRSRVGFGEYSGKTDKYGGGG
FNSSGRSSGFGNFGTGKSGRFGDRN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacatccacaattctcaaaagatcttcttccatattttcacggcgtttcttcgccgcc
attacttccgtcgaactacttccaattcgtcaccgcagcaccttcgccttatcctccgcc
gtctacggcaaaggagacagactttttcacgcgaaatctgaaccgttgaactttcactcc
tcgtcgttggtttctcgtggtgcgcaacttgctgtggattacgatgatgtgcagcatgat
gaaggtttcagtggtagtggcgatgaaggacttgagatcgcaaagcttggaatttctaag
gagattgttaatgctcttgcgaagaaagggatcgcgaaactcttccccattcagagagct
gtactggaacctgcgatgcaagggagggatatgattgctcgagctagaacaggaactggg
aaaactctggcttttgggatacccatcttggataagattattaagtttaatgctaaaaat
gggaaaagaagggatcctatggctatggtgttagcaccgaccagagaacttgcacgtcag
gttgaaaaggaattcaacgaggctgcacctaacttggaaacagtctgtctttatgggggt
atgcctattcagcaacaaatccaccaacttggtggtggcgtagatattgtagttggcaca
cctggacgtgttattgatcttctcaaaaggggttcactgaaattgaaggatgttagttat
gttgttcttgatgaagctgatcagatgcttcaagtaggatttcaagaagcagtggagatt
atcttgcagaagttgccttcaaagcgtcaaactgttatgttctcggcgacaatgccttct
tggataaagaatatttcacgcaattacctaaacaaacccttaacaattgatcttgttgga
gattctgatcagaagttggcagatggaatttcattgtactctattgcatctaatgcctat
tctaaagcaggaattcttgcacctcttataaaagaacatgctaaaggaggaaagtgtatt
gttttcactcaaaccaaacgtgatgctgatcgactatcacatataatgtcaaaaaccctt
aaatgtgaggccttgcatggagatatttcacaaactcagagagaaagaactctcactggc
tttagaaacagttatttcaatgttttagtggcaactgatgttgcttctcgtgggcttgat
ataccaaatgttgatcttgtaatccattatgaacttccaaataattcagagatatttgtt
catcgatctggacgaacaggacgcgctgggaagaaaggaactgctattcttgtccacaca
gaaaatcaatccagggctgtaaagacaattgagcgagatgttggatgtacattcaaagag
ttacctaagattactgttgaaagtggatcagcagacatgtttggtagcatgagtggtgat
cgatacggctctttgggaggcagggatcgtcgatcaggcggtacaggttttggtggtagt
tctggatctggccggaccggctatgggaaatccagtggttttggtggctctggttcaagt
cggtcaagagtggggtttggggaatattctggtaaaacggataaatatggtggtggagga
tttaacagttcaggccgttccagtggctttggaaattttggcacaggtaaatctgggaga
tttggcgacagaaattga
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