KEGG   Trifolium pratense (red clover): 123917339
Entry
123917339         CDS       T08949                                 
Name
(RefSeq) THO complex subunit 5A
  KO
K13174  THO complex subunit 5
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123917339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123917339
   03041 Spliceosome [BR:tpra03041]
    123917339
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     123917339
Spliceosome [BR:tpra03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123917339
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 123917339
NCBI-ProteinID: XP_045824987
LinkDB
Position
LG3:complement(63987..69886)
AA seq 805 aa
MEDGEIEEGSFPMAEEEQQQQTFPPHSSEDNQSEEESPYETLHNSKSSIESIISDILSIK
KQAKPKQLLRDLVTQMFLHFITLRQANRSILIEEDRVKMETERAKAPVDFTTLQLHNLVY
EKSHYLKAIKACKDFKSKYPDIDLVPEEEFFRDAPKDIKDSVLSKDNAHNLMLKRLNFEL
YQRKELCKHHAKLEQKKKILLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGMMHTKKL
KQHHSAELLPPALYVIYSQLLAQKEAFVEPIDLEIVGSLKDAQAFARNQANKDTGISTVM
ESSKLEDDVHDDEEDGQRRRKRPRRVEVKENHDQGGLFKSHPLKIIIHVYEDESSDPKPA
KLITLKFEYLVKLNIVCVGIEGSSDGPDNDILCNLFPNDTGLELPHQSAKLFVQDVTTFN
TQRTSRPYKWAQHLAGIDFLPEVSPLLPADKSEDVVSGLSLYRQQNRVQTILQRIRSRRK
AQLALLEQLESLTKLEWPVLSCKSVPWALHTPLCKLDGWSSIRALPVPGEASSPNIIDKE
EHVQESMDVDVIENSGVTKEEPDSMTEDGELPTLLPKTTKFDHSTQASLISKSITPSLNK
VRSQSFKKVDDSSDFLLDTDSDFDEPAQIESEHENIISEYLARKSLSWMESGVKEFLLVL
SSKTNVVERNVNLEAKIKISMEYPLRPPHFALSLCCKPSGENHLENDGLEWYNELRAIEA
EVNLHMLKTLPANEHNHVLAHQVNCLAMLFDYYLDEGSSSERTNCTTLVDVGLCKPVSGG
FLGRSFRGRDHRKTIAWKDTKFTSG
NT seq 2418 nt   +upstreamnt  +downstreamnt
atggaagacggtgagatagaagagggatcattccccatggcagaggaagaacaacagcaa
caaacctttcctccccattcctcagaagataaccaatcggaagaagaatcaccatacgaa
acacttcacaacagcaaatcttccatcgaatccatcatctccgatatcctctccatcaaa
aaacaagctaaacctaaacaactccttcgagatctcgttactcaaatgttccttcacttc
atcactctccgtcaggcgaatcgttctattttgattgaggaagatcgtgttaaaatggaa
acggaacgggccaaggcgccggtggattttacgacactgcagcttcataatttggtctat
gagaagagtcattaccttaaagcgattaaggcttgtaaggactttaagtcaaagtatcct
gacattgaccttgtgcctgaggaagaattttttcgtgatgctcctaaagatattaaggat
tcggttttgtcgaaagataatgctcataatttgatgctcaagaggctcaattttgagcta
taccagcgtaaagagctttgcaagcatcatgcgaaactggaacagaaaaagaaaatcctt
ttggagactattgcaaaccgaaagaagttcctgacaagtctcccttcacatctcaagtct
ctcaagaaagcatcattgcctgttcaaaaccaactaggaatgatgcatacaaagaaacta
aagcagcatcattcagcagagttgcttccgccagctctttatgtgatttactcacagcta
ttggctcaaaaggaggcctttgtagaacccattgatctggagattgtaggaagcctgaaa
gatgctcaagcttttgctcgcaatcaagccaacaaggacactggcatttccactgttatg
gagagttccaaattggaagatgatgttcatgatgatgaagaagatggtcagagacgtaga
aaaaggccaagaagggtagaagtcaaggagaaccatgaccaagggggtctattcaaaagt
cacccacttaagatcattatccatgtgtatgaagacgagtcttctgatcctaagcctgcg
aaactcatcactctgaagtttgagtacctggtgaagttgaatattgtatgtgttggaatc
gaaggatctagtgatggtcctgacaatgacatcttatgcaatttattccccaatgataca
ggacttgagcttcctcaccagtcagctaaactctttgttcaagatgttacaacattcaat
actcaaagaacttcacgtccttacaaatgggctcagcacctggcaggaattgatttcttg
cctgaggtgtctccattgcttcccgctgacaagagtgaagatgttgtatctggtctttca
ttatatcgccaacagaaccgagttcagacaattctgcagagaattcgctcgaggagaaaa
gctcagttggctcttctggaacagctagaatcacttacaaagcttgagtggcctgttttg
tcctgcaaaagtgttccatgggctttgcacactcctttgtgcaaattggatggctggtca
tcaataagagccctacctgtacctggtgaagcttcatctccgaatatcattgataaagag
gagcatgttcaggaatcaatggatgttgatgtaattgaaaattccggtgtcacaaaagaa
gaaccggatagtatgacggaagatggggagcttcccactttacttccaaagacgactaag
tttgatcactccacacaagctagcttaatttcaaaaagtatcactccttcgcttaataaa
gttaggtcacagagtttcaaaaaagttgatgatagttctgatttcttgcttgacactgat
agcgattttgatgagcctgcacaaattgaaagtgaacatgaaaatatcatatcagagtac
cttgccagaaagtctctttcgtggatggaatctggtgtgaaggaatttttgcttgttctc
agcagtaaaaccaatgtggttgagagaaatgtgaatttagaagctaagatcaagatcagt
atggaatatcctctaaggcctccacattttgcactgagtctttgctgtaaaccttctggg
gagaaccatttggagaatgatggattggaatggtacaatgaacttcgcgcaatagaagcg
gaggttaacttacacatgctaaagacactacctgccaatgaacataatcacgtattggcc
catcaagtgaattgtcttgccatgctgtttgactattatttagatgaggggtcatcatct
gaaaggacaaattgcaccaccttggttgatgttggcttatgcaagcctgttagtggtggg
ttcctgggaagatcttttagaggaagggatcaccggaagacgatcgcctggaaagacaca
aaatttacttcaggctga

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