Trifolium pratense (red clover): 123917350
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Entry
123917350 CDS
T08949
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123917350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123917350
03110 Chaperones and folding catalysts [BR:
tpra03110
]
123917350
03029 Mitochondrial biogenesis [BR:
tpra03029
]
123917350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123917350
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
123917350
Messenger RNA biogenesis [BR:
tpra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
123917350
Chaperones and folding catalysts [BR:
tpra03110
]
Heat shock proteins
HSP60 / Chaperonin
123917350
Mitochondrial biogenesis [BR:
tpra03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
123917350
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123917350
Exosomal proteins of other body fluids (saliva and urine)
123917350
Exosomal proteins of breast cancer cells
123917350
Exosomal proteins of colorectal cancer cells
123917350
Exosomal proteins of bladder cancer cells
123917350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
123917350
NCBI-ProteinID:
XP_045825001
LinkDB
All DBs
Position
LG1:40144714..40149761
Genome browser
AA seq
592 aa
AA seq
DB search
MASCNLSSCNLSSSASISSFPSSSSRRKSSNKVALTRKNRNPKISAMAKELHFNTDGSAI
RKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKL
VRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKALVEELKL
MSKEVEDSELADVAAVSAGNNYEVGNMIAEALSKVGRKGVVTLEEGKSAENSLYVVEGMQ
FDRGYISPYFVTDSEKMTVEFENCKLLLVDKKITNARDLINILEDAIRNGFPILIIAEDI
EQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLTLDKAGN
EVLGTAAKVVLTKDSTTIVGDGSTQEAVTKRVSQIKNQIEAAEQDYEKEKLSERIAKLSG
GVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKATLA
NDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDDTRYGYNAATGKYEDLMSA
GIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPESAPVGNPMDNSGYGM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttgcaatctctcctcatgcaatctttcttcctcagcttccatttcttcattc
ccctcttcttcctcccgcagaaagtcttccaacaaagtcgctctcaccagaaagaatcgg
aaccctaaaatctctgccatggccaaggagttacatttcaacacggatggttccgcaatt
agaaaacttcaaaatggtgtgaacaagcttgctgatttggttggtgttactcttggtcct
aaaggaaggaatgttgttcttgaaagcaaatatggttcacctaaaattgtcaacgatggt
gttactgttgctaaagaggttgagttggaggatccagttgagaatattggtgccaaattg
gtgagacaagcggccgctaagacaaatgacttggcgggtgatggaaccacgacttctgtt
gttttggctcagggtcttattgcagaaggtgttaaggttgttgcagctggtgcaaaccct
gtgcttattacacgtggtattgagaagacagcgaaagctcttgtcgaggaacttaaactg
atgtcaaaggaggttgaagacagtgaattggcagatgtggcagcagtcagtgcagggaac
aattatgaggtcggaaatatgatagctgaggcattgagcaaggttggtagaaagggtgtt
gtgacacttgaagagggaaagagtgctgaaaacagtctctatgttgtcgagggaatgcaa
ttcgatcgaggatacatttcaccctactttgttaccgacagtgagaaaatgactgttgaa
tttgaaaactgcaagttgctattagttgacaaaaagataaccaatgcaagggatcttatt
aacatactggaggatgcaattagaaacggattccctatcttgatcattgcggaggatatt
gaacaagaagctttggcaactcttgttgtgaacaaacttagaggatcactgaagattgca
gcacttaaggctcctggatttggagaacgcaagagccagtaccttgatgatattgccatc
ttgaccggaggtactgttatcagagaggaggttggccttaccttagacaaagctgggaat
gaggttctgggtactgccgccaaggtggtgctcaccaaagattcgaccacaattgttggt
gatggaagtacccaggaagcagttaccaagagagtttcacagattaaaaaccaaattgag
gctgcagaacaagattatgaaaaggagaagctgagcgaaaggattgcaaaactgtctggt
ggtgtggctgtaatacaggttggtgcacaaactgagacagaactcaaggaaaagaaattg
agagttgaagacgctcttaatgctacaaaggcggctgttgaagagggtattgtagttggt
ggtgggtgcacattgctcagacttgcatcaaaggtagatgcaataaaggctacccttgcc
aatgatgaagaaaaagttggagcagacattgttaaaagagctcttagttaccctctgaag
ttaatagcgaaaaatgccggtgtaaatggaagtgttgttagtgagaaggttctgtctaac
gacgatacaagatatggatataatgctgccactggaaaatacgaagatttaatgtctgcc
gggatcattgatccaacaaaggtggtcagatgttgcctggaacatgcagcctctgttgcc
aaaaccttcttgatgtcagactgtgttgttgttgagattaaggaacctgagtctgcacct
gttggcaaccccatggacaattcgggctatggtatgtag
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