Trifolium pratense (red clover): 123917482
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Entry
123917482 CDS
T08949
Name
(RefSeq) cell division control protein 48 homolog C-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123917482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123917482
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123917482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_2
TIP49
IstB_IS21
AAA_33
RNA_helicase
nSTAND3
NPHP3_N
AAA_28
AAA_17
Mg_chelatase
Bac_DnaA
Rad17
AAA_18
NB-ARC
ATPase_2
NACHT
AAA_19
Viral_helicase1
Sigma54_activ_2
Nucleolin_bd
PBP1_TM
DUF6327
CPT
Motif
Other DBs
NCBI-GeneID:
123917482
NCBI-ProteinID:
XP_045825175
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All DBs
Position
LG3:complement(49595941..49602273)
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AA seq
910 aa
AA seq
DB search
MGKFQTTLLRQIDSCKSSFSTADEIVNHLRSTYSDYHHNDYPSLLQLVQNALPATHTTTN
QSSRKRHRIHQSETSTSPHFAPESGGEKAVNGAGGGGGGGEKETSTSPDFAPEMCGEKAS
NGSGGGGGGGGGEKETSTSPDFAPEISGEKASNGAGGGGGGGGENETSTSPDFAPEISGE
KASNGAGGGGGGGGEKETSISPDFAPESSGEKAVNGAGGGGEKETSKTSPKRRKIAESES
EYDYDDFDDDDDDDDAYDDDDERMQNVESTSKGISSEYSSDNGDRVVSKTEMKRGQPVKL
MQFWTGGSVGVGGGDGKKKMKGTMFKDLVGNEMKKIIKELKITVKLLRQPELIREYGMKL
KRGILLHGPPGCGKTRLAHAIGNEAEVPFYPISATDVITAVPGGSEEKLRELFAKAKRTA
PSIIFIDEIDAIASKREDLKRQVDSRIVTQLLTCIDGDGYSGSSDKPTGYVLVIGATNRL
DAVDSALRRPGRFDREILVGIPDESAREEILVLHTRNCSHKLDDSIDLRKIARSTPGFVG
ADLEALVGEVSELAFQRVMDEMEHESHNDLMSDDEGRWKEHWPPQQKNKFAIKMSDFEEA
AKMVQPSLTREGFSPIPDVKWEDVGALDHVREEFDQHILKRIKDPDIYEGLGLNCDTGFL
LYGPPGCGKTLIAKAVANEAGANFIYIKGPELLNKYVGESEHGVRKLFDRARACAPCILF
FDEVDDLSTKHVNEGGTRVIERVLKQLLVELDGAEQRKGVFVISATNRPEVMDSALLRPG
RFGNLIYIPLPSPDDRVSILKALARGKETLARRDQTRARFKLMPIDASVDLCAIARMKAC
ENFSGADLAALMDKAILAALEQKLTTTGEKSDTLTVKARHFEVALSKLSPSVSEEQRKHY
QRLSKNLKAA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagttccaaacaacccttctccgtcaaatcgattcctgcaaatcaagtttctca
accgccgatgaaatcgtcaaccatcttcgttcaacttactccgattaccaccacaatgat
tatccatcactccttcagttagttcagaacgctcttccggctactcacaccaccaccaat
caatcttctcgaaagagacatcgcattcatcaatctgaaacttctacttcccctcatttt
gctcccgagagtggcggcgagaaagctgttaacggcgccggtggtggtggtggtggtggt
gagaaagaaacttctacttcccctgattttgctcccgagatgtgcggcgagaaagcttct
aacggctccggcggtggtggtggtggtggtggtggtgagaaagaaacttctacttcccct
gattttgctcccgagattagcggcgagaaagcttctaacggcgccggcggtggcggtggt
ggtggtggtgagaacgaaacttctacttcccctgattttgctcccgagattagcggcgag
aaagcttctaacggcgccggcggtggtggtggtggtggtggtgagaaagaaacttcgatt
tcccctgattttgctcccgagagcagtggtgagaaagctgttaacggcgccggcggtggt
ggtgagaaagaaacttctaaaacttctccaaagagacgtaagattgctgaatctgaatct
gaatatgattatgatgattttgatgatgatgatgatgatgatgatgcttatgatgatgat
gatgaaagaatgcaaaatgtggaatcgacgagcaagggaatttcgtctgagtattcttcc
gataacggagacagagtagtgtcaaagacagaaatgaaacggggacaaccggttaagtta
atgcagttttggaccggtggtagtgtcggtgttggtggtggtgatggaaagaagaaaatg
aaggggactatgtttaaggatttagttggaaatgagatgaagaagataattaaagaattg
aagataactgtgaaattactgcgtcagcctgaattgattagagagtatggaatgaaactg
aaaagaggaattttgttacatggtcctcctggttgtggaaaaactagacttgctcatgct
attgggaatgaagctgaagttccattttatcctatttctgctactgatgttattactgct
gtccctggtggatctgaagaaaagcttagagagcttttcgctaaagcaaaaaggacggct
ccatcaattatctttattgatgagattgatgcaattgcttcaaaacgagaggatttaaag
cgacaggtggattcacgaatcgtgacacagttattaacttgcattgatggagatggttat
tcagggagttctgataaacctactggttatgttcttgtaattggagccacaaataggctc
gatgctgttgactctgctttgagaaggcctggtcgttttgatcgagaaattcttgttggc
attcctgatgaatctgccagggaggagatccttgtcctgcacacacgaaattgcagtcat
aagcttgacgattcgattgatctgcgaaaaatagccaggtccacgccaggatttgttggt
gctgatttagaagctcttgttggcgaagttagcgaactggcatttcagagggtaatggat
gaaatggaacatgaatcacataatgatctcatgagtgatgatgaaggccggtggaaggaa
cattggccaccccaacaaaaaaataaatttgcaatcaaaatgtctgattttgaggaagca
gccaaaatggtgcaaccttcgttaacaagagaaggattctctcccattcctgatgttaaa
tgggaagatgttggtgcacttgatcatgtaagagaggagtttgatcaacacattctaaag
cgcataaaagaccctgacatttatgagggacttgggttgaattgtgacacgggttttttg
ctttacggacctccaggttgtggtaaaacactgattgccaaagctgttgccaatgaagcg
ggagctaatttcatttatattaagggtcccgagcttctaaataaatatgttggagaaagc
gagcatggagtccggaaattatttgatcgtgcaagagcatgtgcaccatgtatacttttt
tttgacgaggtggatgatttgtcaacaaaacatgttaatgaaggaggtacacgggttatt
gaaagagtgctcaaacagttgcttgttgagttagacggtgcagagcaacgcaaaggtgtt
tttgtgattagtgcaacaaataggcctgaggtgatggacagtgctctcctacggccgggt
agatttggtaatcttatttatattcctcttccaagtccagacgatcgtgtttcgatattg
aaagctcttgcaaggggtaaggaaacgcttgcaaggcgtgatcaaactcgtgcaaggttt
aagcttatgccaattgatgctagtgtggatttgtgcgccattgcaagaatgaaagcttgt
gaaaactttagtggcgctgatcttgcagcattgatggacaaagcaatattggctgctctt
gaacagaagctcaccacaaccggggaaaaaagtgatacattgactgtcaaggctaggcat
tttgaggtagcactgagtaaactatctccctctgtgtccgaagagcaaaggaagcactat
cagcgactttcaaagaaccttaaagcagcgtga
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