Trifolium pratense (red clover): 123917556
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Entry
123917556 CDS
T08949
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123917556
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123917556
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123917556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH_RBM22
zf-CCCH_3
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-CCCH_9
zf-ANAPC11
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
123917556
NCBI-ProteinID:
XP_045825267
LinkDB
All DBs
Position
LG3:50316835..50323341
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AA seq
369 aa
AA seq
DB search
MSKRVLCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDHVKASRSP
SSTPSSSIIEHQPLVSESLVLGNTRITSNDVATAAEFSLFNSPYVVPSEPAWNQESANHD
FLREDDVGQLLITSPSDIPICSFAAAGNCPRGEQCPHVHGDICPSCGRQCLHPFRPEERE
EHMKSCENKQKHLEALKKSQEVECCVCLERVLSKPTAAERKFGVLSECDHPFCISCIRNW
RSSNPTLGMDVNSTLRACPICRKLSYFVVPSVIWYATSEEKQEIVNTYKAKLKSIDCKHF
DFGDGNCPFGTSCFYKHAYRDGRLEEVTLRHLGAADGDTIISKDIRFLFIFTWFLCLALC
TLTFPISLT
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagggttctttgtaagttctttgctcatggagcgtgtctgaaaggggagcat
tgtgaattttctcatgactggaaagctcctccaaataatatatgcacattttatcagaaa
ggagtttgtgcttatggtagtcgctgtaggtatgatcatgtcaaagcttctcgatcaccg
tcctctactccatcttcttcaataatcgaacaccagccccttgtttcagaatctcttgta
cttggtaatacaagaattacatcgaacgatgttgctacagctgcagaattttctcttttc
aacagtccttatgttgttccgagtgaaccagcctggaatcaagaatctgcaaatcatgac
ttcttaagggaagatgatgttggtcaattgttaattacttcaccttctgatattccgatt
tgttcatttgctgctgctggaaactgtccacgaggagaacaatgtcctcatgtacatgga
gatatatgcccttcgtgtggaaggcaatgcttgcatcctttccgtcctgaagaaagagaa
gagcatatgaaaagttgtgaaaataagcaaaagcatctcgaggcattgaaaaaaagtcaa
gaagttgaatgctgtgtttgcctggaacgtgttctttcaaagcctacagccgctgagcgt
aagtttggtgtgctatctgaatgtgatcatcccttctgcatatcctgtattagaaattgg
cgtagtagcaacccaacattagggatggatgtgaacagcacattgcgggcttgtcccatc
tgtcgcaagctatcttactttgtcgttccaagtgttatttggtatgctacaagtgaagaa
aaacaggaaatcgttaatacctacaaggcgaagctcaagtcaatcgactgcaagcatttt
gactttggggatggaaactgcccttttggaactagctgcttctacaagcatgcatatcga
gatggccgtcttgaggaagtaactttgcgacatcttggggctgctgatggtgacaccata
atttccaaagacatcaggtttctctttatctttacatggttcttatgcttggcattgtgc
actttgacttttccaatttcactaacttaa
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