Trifolium pratense (red clover): 123917687
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Entry
123917687 CDS
T08949
Name
(RefSeq) heat stress transcription factor A-4c
KO
K09419
heat shock transcription factor, other eukaryote
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123917687
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
123917687
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
HH_AprE
CENP-F_leu_zip
UPF0242
Perilipin
Sec3_CC
ADIP
TMF_TATA_bd
CC_Bre1
GPS2_interact
GrpE
DUF3450
UBA_ARI1
CLZ
Mu_Gam-Sipho_Gp157-TOTE
Motif
Other DBs
NCBI-GeneID:
123917687
NCBI-ProteinID:
XP_045825433
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Position
LG3:10335950..10340991
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AA seq
401 aa
AA seq
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MDEAGSSSSLPPFLAKTYEMVDDPSSDPIVSWSMSNKSFVVWNPPEFARVLLPRFFKHNN
FSSFIRQLNTYGFRKVDPEQWEFANDDFIKGQPHLLKNIHRRKPVHSHSLHNLQAQTPLS
ESERQNLNDEIEKLKQDREQLVTEIKRYQHEFQTYEIQIHCSKDRLEKLEQKQQKMVSSV
SQVLQKPVNAVSLLSLTETMDRKRRLPARSGCVNNEASVEDAMETSVALTGENAEGSSIL
TLNTERLDQLESSVLFWEIIAQEVADSLVHTHSNIDFDESTSCADSLSISCRQIDVEVRP
KSPEIDMNAEPAAAAPETVASKEQPVGITTAATGVNDVFWEQFLTEDPGASEAQEVQSER
KDNNSRKNEGKPGDHGRFWWNMRKGNNLPEQMGNVGQVEKI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagctggaagttcaagttccttgcctccttttctggcaaagacttatgagatg
gtggatgatccttcctcggatcctatcgtttcgtggagtatgagtaacaaaagttttgtt
gtatggaatcctccagaatttgcaagggttttgcttcctagattctttaagcacaataac
ttctccagttttatcaggcagctgaatacatatggatttaggaaagttgatccagaacaa
tgggagtttgccaatgacgattttataaaggggcaaccacatcttttgaagaatattcat
agacggaagccggttcatagccattctctgcataatcttcaagcacaaacgcctttatca
gagtctgaaaggcaaaatttgaatgatgaaatagagaagctgaaacaagacagagaacaa
cttgttacagagataaagagataccaacatgagtttcaaacatatgagattcaaattcat
tgctcgaaagatcggttggagaagttggagcaaaagcaacagaagatggtgtcttctgtt
tctcaagtactgcagaagcctgtgaatgctgtaagtctcttgtcactgacagaaacaatg
gatagaaaacgaaggttgccagcgagaagtggctgtgttaataatgaagctagcgttgaa
gatgctatggaaacttctgtagctttgaccggagaaaatgcagagggttcctctattttg
acattaaacacagagagattggatcaacttgagtcatccgtgttattttgggagattatt
gcgcaggaagttgccgacagcctggttcacactcattcaaacattgattttgatgaatct
acaagctgtgctgatagtttgtctatatcttgtcggcaaatagatgttgaagttcgacct
aagtcacctgaaattgacatgaacgctgaaccagctgctgctgctcctgagaccgttgca
tcaaaagaacaaccagtgggtatcaccactgcagcaactggggttaatgatgtattttgg
gaacagttcttgacagaggatcctggtgcatcagaagcacaggaagtacaatccgaaaga
aaggataataatagcagaaaaaatgaaggaaaacctggtgatcacggaagattttggtgg
aatatgcggaaaggaaataatcttccagaacaaatggggaatgttggtcaagtagagaaa
atttag
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