Trifolium pratense (red clover): 123917719
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Entry
123917719 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123917719
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123917719
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123917719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
Zn_ribbon_6
zf-RING_10
zf-RING_4
zf-Nse
zf-ANAPC11
TRAF3_RING
Prok-RING_4
RING_XB3-XBAT31
TerY_C
Zn_ribbon_19
Sina_RING
Zn_ribbon_RlmA
zf-P11
Motif
Other DBs
NCBI-GeneID:
123917719
NCBI-ProteinID:
XP_045825481
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All DBs
Position
LG3:complement(24171283..24175237)
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AA seq
225 aa
AA seq
DB search
MSSRTGRVTAVRGYSRRRKVGLDLDLNLPAGEIPIIENLAGENREQEGPSIQLGLQEVEV
HANPQPIVLVEAPMIDVEEIDDDVIESSPRAFAEAKNNSRRNRGRTIVDVDLEEQTRVSN
NNRYKRRREPPNQTIINCDLYINLEGSSSSTQMETVKKPPEPPKEPVFSCPICMGPLVEE
MSTRCGHIFCKACIKAAISAQAKCPTCRKKITVKELIRVFLPTTK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcggaccggtagggtaactgctgtcagaggttacagccggcgaaggaaggta
gggttggaccttgaccttaatttaccggcaggtgagattccgattattgagaatctggct
ggtgaaaatcgcgagcaagagggaccttcgattcagttggggcttcaagaagtagaagtt
catgctaacccgcagcccattgtacttgtagaagctcctatgattgatgtggaggaaatt
gatgatgatgttattgaatcttccccgagggcttttgctgaggctaaaaacaattctaga
agaaatcgcgggaggactatagttgatgtggatttagaagagcagactagggtaagcaac
aataatcgctacaaacgcagaagagaacctccaaatcaaacaattatcaattgtgatctt
tatataaatttggaaggcagtagcagctctacgcagatggaaactgtcaaaaagccacct
gagcctccaaaggaacctgtcttcagctgtcctatatgcatgggccctttggtcgaagaa
atgtcgacaaggtgtggtcatatattttgcaaggcttgtatcaaggctgctataagtgct
caggctaaatgtcctacatgtagaaaaaagattactgtgaaagagcttataagggtgttt
ctcccaacaactaaataa
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