Trifolium pratense (red clover): 123917722
Help
Entry
123917722 CDS
T08949
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123917722
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
123917722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
123917722
NCBI-ProteinID:
XP_045825487
LinkDB
All DBs
Position
LG3:24208316..24214742
Genome browser
AA seq
1115 aa
AA seq
DB search
MTATPPSKPLTHHDWETLIENFQSATGIEKWNSLDPPLSDHLLTSLLRKDLHLQLKFQLL
IFLDEFSISIFPHKNLNRLIESLKTVIQSPPDPVHITPLFKEQFIISVTSVIVCFSDDEN
DIHTVTESLVEVLLTVINRPNFGSDRHTRAIACECLRELERSKPCLLSDVVGHLWSLCQN
ERTHASQSYILLFTMVIHNIVDKKLSVSILNTSLPMLPFNTPQCVNQEDFGSDSGLNTKE
LRRALAFLLEWPQVLTPCGMMEFVSMVIPVVVALELQPSMLRVQLFGMIHSYDPLLCHVV
LAMFMRFIDAFDGQEGEVSSRLLLISREAHHYLVFRLLAIHWLLGFNQLVFSKQSRIEKN
IENGNEACSTFYPSLFDPLALKALKLDLLASSSVLRLKSDSDYNSSSRDGDDGLVDTVKV
FEQGLLAVSSFKWLPPGSTEIAIAFRTFHKFLIAGSSHSDSDPSTTRNLLDSMIFRTLQV
MLVNMMLESRRLVPVVAAFVDRLVSCKKHSWLGERLLQKFDAHLLPKVKMDYKLVYCFPI
FDRIAENQTIPPCGLLELLTNFMIFLVEKHGPDTMMKSWSQGSRALGICRTMLVHHHSSR
LFLRLSRLLAFTCLYFPDLEVRDNSRTYLRMLVCIPGKKLRDILSLGGTMLGISPSSHQT
SFFNVQSPRPSQRFKTFINLASCIHFERLTPLLVKQFWSLSLSSLVVSNSKPAYLGGIRD
LEAPIEEKEFSDSSNSPVIPETGRTNQSHEPLRVMDSNIAEILNTLRKYFSCIPDFRYMA
GLKVSISCSLRFESNTFNRMLGINNTATAQDEIDALPAIYATVLHFSSSAPYGSIPSYHI
PFLLAEPHSKDHASQNASLSIVPLGKEDSREEEKHRATVVIDLEPREPTPGIVDVHIETN
AENGQIIQGQLQGITVGIEDMFLKAIVPSDIQEDARPQYNFDLFTALWEACGSSSSTGRE
TFQLKGGKGIAAISGTQSVKLLDVPANSLIQATERHLARFVVGVSGEPLIDAVWEGGIIQ
NVIWEDASPDATPVTNSDMGPLRLTYNNEEYEKGGIINSRQKNLGIFLVLIFLPPRFHLL
FQMEVGDVSTLVRIRTDHWPSLAYIDDYLEALYLS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacaccaccgtcaaagccactaacacatcacgactgggaaaccctaattgaa
aatttccaatccgccaccggaatcgaaaaatggaactctctagatccacctctctccgat
catctcttaacctctcttctccgcaaagacttacatcttcaactaaaattccaactcctc
atcttcctcgacgaattctccatttcaatcttccctcacaaaaatctcaaccgtctcatc
gaatctctcaaaaccgttattcaatcacctcccgaccccgttcacatcactccgttgttc
aaggaacagttcatcatttccgttacctccgttatcgtttgtttctccgatgacgaaaat
gatattcatacggtaacggagagtttggttgaagttctgttgacggttattaaccgtccg
aatttcggttctgatcgtcacacacgcgccatcgcgtgtgagtgtttgagagaattggaa
cgatctaaaccgtgtttactttccgatgtggttggacatttgtggagtctttgccagaat
gaacgaacacacgcttcacaatcttatatcttgcttttcacaatggtgattcataacatt
gttgataagaaacttagtgtttcgattctcaatacatcgcttccaatgcttccttttaat
acaccgcaatgcgtgaatcaagaggattttggttcggattcgggtttgaatacgaaagaa
ttgaggagagctttggcgtttttgttggagtggccacaagtgttgacaccatgtggaatg
atggagtttgtttctatggtcatacctgtggtagtggctttggaattgcaaccttcaatg
cttagggttcaattgtttggtatgattcattcttatgatcctcttctttgtcatgttgtt
ttggctatgtttatgcgttttatagatgcttttgatggtcaagaaggcgaggtttccagt
agactcttgttgatttcgagagaagctcatcattatttggtgtttcggttgttggcgatt
cattggctgttgggtttcaatcaattagtttttagtaaacaatcgcgtattgagaagaat
attgagaatggaaatgaagcttgttccactttttatccttctttgtttgatccgttggct
ttgaaagcattgaagcttgaccttcttgcttctagctctgtcttgagactcaaaagtgat
tcggattataattctagttcccgtgatggtgatgatggtttggttgataccgtgaaggtg
tttgaacagggtctccttgctgtatcatctttcaaatggttgcctccggggagcacggag
attgcaattgcgtttcgtacttttcacaagtttctcattgctggttcgtctcattctgat
agtgatccttccacaacaagaaatcttttggactctatgatatttcgtactttacaggtg
atgcttgtgaacatgatgttggagagtcggagattggttcctgttgttgctgcttttgtg
gaccgtttagtatcctgtaagaagcattcttggttgggcgagcgcttacttcagaaattt
gatgcacacttacttccaaaagtgaaaatggattataagttggtttattgcttcccaata
tttgatagaattgctgagaatcagacaatacctccatgtggattgttagagctactcaca
aactttatgattttccttgtggagaaacatggcccggatacgatgatgaaatcttggtcc
caaggaagtagagctcttggaatttgtcgaactatgttggtacaccaccatagttctaga
ttgttccttagactatcccgtctacttgctttcacctgtctctattttcctgatttggaa
gtccgtgataattcaaggacctacttacgtatgctggtctgcattccaggaaagaagctt
agagatatcctgagcctgggaggcacgatgcttgggatttcaccttcttcacaccaaacc
tctttcttcaatgttcagtcaccacgaccttctcagagattcaagacatttataaaccta
gcatcctgcattcactttgagcgtctgaccccattgcttgttaagcagttttggtctttg
tctttatcaagtttagttgtgagtaatagcaagcctgcttatctgggtggcatcagggac
cttgaagctcctatcgaggaaaaggaattttctgacagttccaattcaccggtcattcct
gaaactggaagaacaaaccaatcacatgagccactccgtgttatggactctaacattgca
gaaattttgaacacgttaaggaagtacttttcctgtattcctgacttcagatatatggca
ggactcaaagttagcatatcgtgcagtttgagatttgaatctaatactttcaatcgcatg
ttgggaatcaataacactgccacagcccaggatgagatagatgcacttcccgctatatat
gctactgtattacatttttcctcttctgcgccatatggatcaatcccatcctatcatata
cctttccttcttgctgaacctcacagtaaagatcatgcatctcaaaatgcctccctcagt
attgttcctctcggaaaggaggattctcgagaagaggaaaaacatagagctactgttgtg
attgatttggagcccagagaaccaacaccaggtatagttgatgttcacatcgaaacaaat
gcagaaaatggtcagatcatccaaggtcaacttcagggaatcacagtaggcatagaagac
atgtttcttaaggccattgttccatcagatatccaagaagacgcaagacctcagtacaac
tttgacttgttcactgctttatgggaggcatgtggctcatcctctagcactgggcgggaa
acctttcaattgaaagggggaaaagggattgctgccataagtggaacgcaatctgtcaag
cttcttgacgtccccgcgaactctttgatccaggcaactgagcgccatctggcacgtttt
gttgtaggtgtgagtggggagccacttatcgatgctgtatgggaaggggggatcattcag
aatgtcatttgggaagatgcttcccctgatgccactccagttacaaatagtgatatgggc
cctctccgtcttacatacaataatgaagagtatgaaaaggggggaattatcaatagcagg
caaaaaaatctgggcatttttcttgttctaatattccttccaccgcggttccatctcctt
ttccagatggaagttggcgatgtttcaactttagttcgtattcgcacagatcattggcct
agcttggcctacattgatgattatctagaagctttatatctatcataa
DBGET
integrated database retrieval system