KEGG   Trifolium pratense (red clover): 123917845
Entry
123917845         CDS       T08949                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123917845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123917845
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     123917845
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Zn_ribbon_RanBP
Other DBs
NCBI-GeneID: 123917845
NCBI-ProteinID: XP_045825666
LinkDB
Position
LG3:complement(10126745..10134564)
AA seq 796 aa
MPRKVNYGFDYDNDDYDDYDDDYDYDVDTDNNNNNNNYGAGEGPDTKQETIKTGVWGCSI
CTYDNDESMTSCDICGVMRYPLVNNGTSNSNKTVGDINKTPGASKLARSLFQPLPQQIPK
EVVLFPMRDVGFWTDGSNIYKFENVQGEFHEIHKDFNTQSHTSLNIDPFKFDVPSPDDVV
FTGLHSSKKGLKDKVKNSKDSQLSSSSREKKELAVESNAESLDNLSSLMQKNKQDSAAKN
KLSKNVEINLETIGETLNSLSSSLPKDKGDNANRINSSKNGTHGTQSNKEKSGSLSALPK
VEESDKLSLSSNKDGKSESASSSFNHMVLDERSGNSDNTNAKGPHKQVPYQPEKWMLPQQ
SEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKEMHKNEKEAKLQGKGSFAYAWAL
DESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFIPNMISGATQADAAILVIDASL
GAFEAGMDGGKGQTREHAQLIRSFGVDHVIVAVNKMDAVAFSKDRFDFIRHQLGIFLRSC
GFKDSSLSWIPLSAMENQNLVASPSDARFKNWYTGPYLLDAIDSLQPPTREFAKPLLMPI
CDIIKSTAQGQVSACGKLEAGALRSGTKVLVMPSDVVGTVRTLERDSNVCSVARAGDNVS
VTLHGVDGSHVFSGGVLCHPDFPVAIAKHLELKLLVLDGASPILVGAQLEFHIHHAKEPA
RVSKILSVLDPKTGKVTKKSPRCLTSKQSAVIEVILHEPVCVVEFSRCKALGRVSLRSLG
RTIAVGLVTRIIEEQG
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgcctcgtaaagttaactatggatttgattacgacaatgatgactatgatgactatgat
gatgactatgattatgatgttgacactgataataataataataataataattatggagca
ggagaagggcctgatacaaagcaagagaccatcaagactggagtttggggatgctccatt
tgtacttatgacaatgatgagagtatgacttcgtgtgatatttgtggcgttatgcgttat
cccttggttaacaatggaacttccaacagtaacaaaacagttggagatataaacaaaact
cctggagcatccaagttggccaggtctctttttcaaccattaccacaacagattcccaaa
gaggttgtattatttccaatgcgggatgttggtttttggacagatggcagtaacatctac
aagtttgagaatgtccaaggcgaatttcatgaaattcataaggattttaatactcaaagc
catacctctttaaatatagatcctttcaaatttgacgttccatccccagatgatgtggtt
tttactggcctacattcttcaaaaaagggtttgaaagacaaagttaaaaactctaaagat
tctcagctttcatcaagcagtagagagaagaaagaacttgctgtagaatccaatgctgaa
agtctagataacctatcatccttgatgcaaaagaacaagcaggatagtgcagccaagaac
aagctttccaaaaatgtagaaattaatcttgaaacaattggtgaaactttaaacagctta
tcatcatctttgccaaaggacaaaggagataatgcaaatagaataaattcttcgaaaaat
ggtacacatggtacccagtcaaacaaagaaaagtctggtagtttgtccgcactgccaaaa
gtcgaagaaagtgataagcttagtttgtcttctaacaaagacggaaagtctgaaagtgct
tccagcagtttcaaccacatggttcttgatgaaagatctggaaattctgataatactaat
gctaagggacctcataaacaagttccttaccagccagaaaagtggatgctccctcaacag
tctgaagatacgttgactcagttgaatcttgcaattgttggtcatgttgattctggaaaa
tcaacactatccggtaggttattacacctattgggacgaatttccaagaaagaaatgcac
aaaaatgaaaaggaggccaagttacagggcaaaggatcctttgcttatgcttgggcactt
gatgaaagttctgaagaaagggaaaggggaataaccatgacagtagctgtggcatatttt
gacactaagaaatatcacgttgttgtgctcgactctcctggtcataaagattttatccca
aatatgatttctggagctacacaagctgatgctgcaattcttgttatagatgcctcactt
ggtgcatttgaagctggtatggatggtggcaaaggacaaacaagggaacatgcacaactt
ataagaagttttggtgtagaccatgttatagttgcagtaaataagatggatgctgtagca
ttctccaaagaccgttttgattttataagacatcagctgggaatttttctccgttcatgt
gggttcaaagattcttctctctcatggattcccttgagtgccatggaaaatcaaaatttg
gtggcatccccttctgatgctcgtttcaaaaactggtatactggaccttatctgttagat
gcaattgattcattacaacctcctactagagaattcgcaaaacctctgttaatgccgata
tgtgatatcatcaaatcaactgcgcaaggacaggtgtctgcttgtggtaaactggaagca
ggagctcttagaagtggaacaaaggttttagttatgccttcagatgttgttggaacagta
cgcacattggagcgtgactctaatgtctgctctgttgcaagagctggagataacgtgtcc
gtaacattgcatggtgttgatggaagtcatgtattttctggaggcgtattgtgtcatcct
gattttcctgttgcaattgcaaagcatttggagttgaaattgcttgtcttggatggtgca
agtcccatattggtcggcgcccagttagagtttcatatacatcatgcaaaggaacctgct
agagtttcaaaaatattgtcagtacttgatcccaagaccggtaaggtgaccaaaaagtcc
cctcgctgtctcacgtcaaaacaaagtgcagtaattgaggtgattttgcatgagccagtc
tgtgtggtagagttttctagatgtaaagctcttggaagagtatcccttagatcattagga
agaacaattgcagttggacttgtgacaagaataatcgaagaacaaggttaa

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