Trifolium pratense (red clover): 123917845
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Entry
123917845 CDS
T08949
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123917845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123917845
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123917845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
123917845
NCBI-ProteinID:
XP_045825666
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Position
LG3:complement(10126745..10134564)
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AA seq
796 aa
AA seq
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MPRKVNYGFDYDNDDYDDYDDDYDYDVDTDNNNNNNNYGAGEGPDTKQETIKTGVWGCSI
CTYDNDESMTSCDICGVMRYPLVNNGTSNSNKTVGDINKTPGASKLARSLFQPLPQQIPK
EVVLFPMRDVGFWTDGSNIYKFENVQGEFHEIHKDFNTQSHTSLNIDPFKFDVPSPDDVV
FTGLHSSKKGLKDKVKNSKDSQLSSSSREKKELAVESNAESLDNLSSLMQKNKQDSAAKN
KLSKNVEINLETIGETLNSLSSSLPKDKGDNANRINSSKNGTHGTQSNKEKSGSLSALPK
VEESDKLSLSSNKDGKSESASSSFNHMVLDERSGNSDNTNAKGPHKQVPYQPEKWMLPQQ
SEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKEMHKNEKEAKLQGKGSFAYAWAL
DESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFIPNMISGATQADAAILVIDASL
GAFEAGMDGGKGQTREHAQLIRSFGVDHVIVAVNKMDAVAFSKDRFDFIRHQLGIFLRSC
GFKDSSLSWIPLSAMENQNLVASPSDARFKNWYTGPYLLDAIDSLQPPTREFAKPLLMPI
CDIIKSTAQGQVSACGKLEAGALRSGTKVLVMPSDVVGTVRTLERDSNVCSVARAGDNVS
VTLHGVDGSHVFSGGVLCHPDFPVAIAKHLELKLLVLDGASPILVGAQLEFHIHHAKEPA
RVSKILSVLDPKTGKVTKKSPRCLTSKQSAVIEVILHEPVCVVEFSRCKALGRVSLRSLG
RTIAVGLVTRIIEEQG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagttaactatggatttgattacgacaatgatgactatgatgactatgat
gatgactatgattatgatgttgacactgataataataataataataataattatggagca
ggagaagggcctgatacaaagcaagagaccatcaagactggagtttggggatgctccatt
tgtacttatgacaatgatgagagtatgacttcgtgtgatatttgtggcgttatgcgttat
cccttggttaacaatggaacttccaacagtaacaaaacagttggagatataaacaaaact
cctggagcatccaagttggccaggtctctttttcaaccattaccacaacagattcccaaa
gaggttgtattatttccaatgcgggatgttggtttttggacagatggcagtaacatctac
aagtttgagaatgtccaaggcgaatttcatgaaattcataaggattttaatactcaaagc
catacctctttaaatatagatcctttcaaatttgacgttccatccccagatgatgtggtt
tttactggcctacattcttcaaaaaagggtttgaaagacaaagttaaaaactctaaagat
tctcagctttcatcaagcagtagagagaagaaagaacttgctgtagaatccaatgctgaa
agtctagataacctatcatccttgatgcaaaagaacaagcaggatagtgcagccaagaac
aagctttccaaaaatgtagaaattaatcttgaaacaattggtgaaactttaaacagctta
tcatcatctttgccaaaggacaaaggagataatgcaaatagaataaattcttcgaaaaat
ggtacacatggtacccagtcaaacaaagaaaagtctggtagtttgtccgcactgccaaaa
gtcgaagaaagtgataagcttagtttgtcttctaacaaagacggaaagtctgaaagtgct
tccagcagtttcaaccacatggttcttgatgaaagatctggaaattctgataatactaat
gctaagggacctcataaacaagttccttaccagccagaaaagtggatgctccctcaacag
tctgaagatacgttgactcagttgaatcttgcaattgttggtcatgttgattctggaaaa
tcaacactatccggtaggttattacacctattgggacgaatttccaagaaagaaatgcac
aaaaatgaaaaggaggccaagttacagggcaaaggatcctttgcttatgcttgggcactt
gatgaaagttctgaagaaagggaaaggggaataaccatgacagtagctgtggcatatttt
gacactaagaaatatcacgttgttgtgctcgactctcctggtcataaagattttatccca
aatatgatttctggagctacacaagctgatgctgcaattcttgttatagatgcctcactt
ggtgcatttgaagctggtatggatggtggcaaaggacaaacaagggaacatgcacaactt
ataagaagttttggtgtagaccatgttatagttgcagtaaataagatggatgctgtagca
ttctccaaagaccgttttgattttataagacatcagctgggaatttttctccgttcatgt
gggttcaaagattcttctctctcatggattcccttgagtgccatggaaaatcaaaatttg
gtggcatccccttctgatgctcgtttcaaaaactggtatactggaccttatctgttagat
gcaattgattcattacaacctcctactagagaattcgcaaaacctctgttaatgccgata
tgtgatatcatcaaatcaactgcgcaaggacaggtgtctgcttgtggtaaactggaagca
ggagctcttagaagtggaacaaaggttttagttatgccttcagatgttgttggaacagta
cgcacattggagcgtgactctaatgtctgctctgttgcaagagctggagataacgtgtcc
gtaacattgcatggtgttgatggaagtcatgtattttctggaggcgtattgtgtcatcct
gattttcctgttgcaattgcaaagcatttggagttgaaattgcttgtcttggatggtgca
agtcccatattggtcggcgcccagttagagtttcatatacatcatgcaaaggaacctgct
agagtttcaaaaatattgtcagtacttgatcccaagaccggtaaggtgaccaaaaagtcc
cctcgctgtctcacgtcaaaacaaagtgcagtaattgaggtgattttgcatgagccagtc
tgtgtggtagagttttctagatgtaaagctcttggaagagtatcccttagatcattagga
agaacaattgcagttggacttgtgacaagaataatcgaagaacaaggttaa
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integrated database retrieval system