Trifolium pratense (red clover): 123917997
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Entry
123917997 CDS
T08949
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123917997
Enzymes [BR:
tpra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
123917997
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123917997
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
123917997
NCBI-ProteinID:
XP_045825881
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All DBs
Position
LG3:complement(36325605..36333680)
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AA seq
380 aa
AA seq
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MMKRKREDQDCMDIVWQTPANPPLPQDYIFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDL
FAEEFKGRPYDYYVSAVKCGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMACEVPIL
LKEPDVLTVCKPASVPVHPCGQYRKNTVVGILQAEHGLAPVFPIHRLDRLVSGLLIMARN
ASKADSFRQEIEAGLVKKQYIAKVVGEFPENELIVDANIDYNAREGRSTAEVRDSAKGKV
ASTKFTRISCNGTHSIVLCEPVSGRTHQIRVHLQYSGHPIANDMLYISEQPVDRSISGSA
ADRSSRISNASLTSNFDENVPNECHENSNEDFGFDSMCTNCPNLAPKGYDGDEEGLWLHC
MKYSGPGWTYECPYPDWAKL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaggaaaagagaagaccaagattgtatggatatcgtatggcaaacacctgca
aatcctccgctaccgcaagactacatcttccgtaacggaattcgatacgttagaccttac
tacttcgaatttatcgctcatgttaaaaatcgatgggcgggaaaaactatcgtagatttg
ttcgctgaagaatttaaaggtcgaccttatgattattatgttagtgcggtgaaatgtgga
agaattcaagttgatggcgaaatggtgccggtttcgtatgtagttaagtcatctcaaaag
ataagccattttttacacaggcatgaaccacctgtgatggcttgtgaggttcctattctt
ttaaaagaaccggatgtgctaactgtttgtaagccggcatctgtcccggttcatccatgc
ggtcaatatcgtaagaacactgttgttggcattcttcaagcagagcatgggctggctcct
gtgtttcctatccatcgactggatcgccttgtctcaggactccttattatggccagaaat
gcttcaaaagctgacagttttaggcaagagattgaagctggcttagtcaagaaacagtat
attgcaaaagtagttggcgagtttccggagaatgagctaattgttgatgccaatatagac
tataatgctcgagaaggaaggagcacagcagaggtcagagactctgcaaaggggaaggtc
gcctctacaaaatttactcgaattagttgcaacggtactcatagtattgttttatgtgaa
ccagtcagtggccgcactcatcagatacgcgttcatttacagtattctggacacccgata
gcgaatgacatgctgtacatttcagaacaacctgttgatcgatctattagtggatcagct
gctgatagatcatctcgcatatcaaatgcttctttaacatcaaattttgatgaaaatgtg
cccaatgaatgtcacgaaaactccaatgaggattttggttttgattccatgtgtacgaac
tgtccaaatttggcaccaaaaggatatgatggtgatgaagaaggtttgtggctacattgt
atgaagtactccggacctggatggacgtatgaatgcccgtatcctgattgggcgaaactt
tag
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