Trifolium pratense (red clover): 123918173
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Entry
123918173 CDS
T08949
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123918173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123918173
Membrane trafficking [BR:
tpra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123918173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_8
TPR_14
TPR_19
TPR_9
TPR_7
TPR_12
PPTA
HAT_Syf1_CNRKL1_N
TPR_20
TPR_10
PEX18_PEX21_C
Wzy_C_2
NGF
TPR_Slam
RAMA
HAT_PRP39_N
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
123918173
NCBI-ProteinID:
XP_045826104
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Position
LG3:53416879..53425781
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AA seq
745 aa
AA seq
DB search
MAMRDLITGATSCPDPSSSSSSQNPLGSLANALIGSSSKTQERLKEIPTSTSTPSASSQF
YSQPLTNIPGSEFDTPFLDANSQGSEFLNRFRSAGAGGFEDTWDEIQRDGNQLRLYDGRG
QLPPQIHQTTLDGTPQRVLSTFLHSFLDSSRGGIPFHPAPLPVLGLSEGDKQCIRDRSSI
MARHLFADKSEEFIHAQVNALLSSLDIDSNVRGKGPMPERFRELDDYWNESQGNQIHGAH
AADGWISEFSQNRERYDNPDAWANSFEQQHGVNGWVSEFEHSQLSSVDQMRGMNMSNIAA
MEQTRMLANTLAQNADPKFQNSKFLQFVSKMSRGELIIDDNQVKETALPAPGDWASEYQQ
QYNRGDAWAGEFLNNKAFSGVGPEMWANEFANERQQNGAVDDQWVDEFSKLHVNDWADEF
GQQVGEGAFGEGSSDNWAQAYDEFLNEQVAAKQRSDSSTGVYVFSDLNPYVGHPNPLKEG
QDLFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEADPTN
LEVLLALGVSHTNELEQNAALKYLFGWLRNHPKYGTIAPPEMSDSLYYADVNRLFNEAAV
ISPDDADVHIVLGVLYNLSREYDKAIAAFERALKLKPHDYSLWNKLGATQANSVQSADAI
SAYQQALDLKPNYVRAWANMGISYANQGMYDESIRYYVRALAMNPKADNAWQYLRISLSC
ASRNDMLEACDSRNLDLLQKEFPLQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgtgatcttatcacgggtgctacttcttgccctgacccttcttcttcttct
tcctctcaaaaccctctcggttctctcgctaacgctctcatcggttcttcctccaaaact
caggagaggttgaaggaaattcctacatcgacttctactccgtctgcatcatcgcaattc
tactctcaacctcttactaatattcctggttccgaattcgatacaccttttctcgatgct
aattctcagggttcggagttcttgaataggtttaggtctgctggtgcgggtgggtttgag
gatacgtgggatgagatacaacgtgacgggaatcaactccggctctatgatggcagggga
cagcttccaccacagattcatcaaaccacactggatggaacaccacaaagagttctatct
accttcttgcactcatttcttgatagcagtcgtggtggaataccttttcatcctgctcct
cttccagtattgggtttatctgaaggtgataaacagtgtatacgtgaccgaagcagcata
atggccagacatctctttgcagataaaagcgaagaatttatccatgcccaagtcaatgca
cttttgtcctctctagatattgacagtaatgtccgtggcaagggacctatgcctgaaagg
tttagggagcttgatgattattggaatgagtctcaaggcaaccagatacacggtgctcat
gctgcagacggatggatttccgaattcagtcaaaatagggaaagatatgataatcctgat
gcatgggctaactcatttgagcaacagcatggtgttaatggttgggtctctgaatttgaa
cattctcaattgtcatcagtagatcaaatgcgaggtatgaacatgtcaaacattgctgca
atggagcagacccgtatgcttgcaaatacattggcccagaatgctgaccctaaatttcag
aactcaaagttccttcaatttgtatcaaagatgagccgcggtgagttaattatcgatgac
aatcaagttaaagagactgcattacctgcacccggagattgggcatcagaatatcagcag
cagtataatcgtggtgatgcatgggctggtgaattcttaaataataaggctttttctgga
gttggacctgaaatgtgggcgaatgaatttgcaaatgaaagacaacaaaatggagcagtt
gatgaccagtgggttgatgaattctcaaagttgcatgttaatgactgggcagatgaattt
ggtcagcaggttggtgaaggagcctttggggaaggctcttcagataactgggctcaggca
tatgatgagttcctgaatgagcaagttgctgctaagcagcggtcagatagctcaacgggc
gtgtatgtgttttcagatttaaatccttatgttggtcatccaaatccactaaaagaaggc
caagatctcttccggaaagggcttttaagtgaagcagttctagcactagaagctgaagtc
ttgaaaaaccctgaaaatgccgaaggatggagactacttggaatagcccacgcagaaaat
gacgatgatcaacaggcgattgcagcgatgatgcgtgcacaggaggctgatccaacaaac
ttggaggtgcttcttgctcttggtgtcagtcatactaatgaactggagcaaaatgctgct
ttaaagtatctatttggatggttacggaatcacccaaaatatggaacaattgccccacct
gagatgtctgattcgttgtactatgctgatgttaatagattattcaacgaagcagctgta
atctcacctgatgatgcagatgtccacatagttcttggggttctgtacaacttatccaga
gaatatgacaaagctattgcagcttttgaacgagcattgaaacttaagccacatgactac
tcactctggaacaagcttggtgcaacacaagcaaacagtgttcaaagtgctgatgcaata
tcggcttatcaacaggcacttgacttaaagcctaattatgttcgtgcatgggcaaatatg
ggtattagttatgcaaaccagggcatgtatgacgagtctattcgttattatgttcgagcg
cttgccatgaatccaaaagcagacaatgcatggcaatatttgagaatttcattaagttgc
gcttctaggaatgacatgttggaagcttgtgatagtcgtaatttggaccttctccagaag
gagttccctctgcagtaa
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