Trifolium pratense (red clover): 123918306
Help
Entry
123918306 CDS
T08949
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123918306
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123918306
04121 Ubiquitin system [BR:
tpra04121
]
123918306
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123918306
Peptidases and inhibitors [BR:
tpra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123918306
Membrane trafficking [BR:
tpra04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
123918306
Ubiquitin system [BR:
tpra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123918306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Zn_ribbon_DUF2089
Motif
Other DBs
NCBI-GeneID:
123918306
NCBI-ProteinID:
XP_045826269
LinkDB
All DBs
Position
LG3:8172282..8176661
Genome browser
AA seq
605 aa
AA seq
DB search
MDMKKTVTLLFGLTDTNLTLSSTIRLALPTIATIAVITIAFKEFKSSKRIISFSGFDSRL
FITDSEKPILIPGLQNLANNCFLNVVLQALASCVCFQSFLDNVIAEYETDEQLVENMPLI
FSLASLLQELSSVSTEKVILSPTKLMHAMSSYIPDFDLTSQQDAAEAFVHLMSSLREESG
GCYAPKISSLADIFASNNRILTPIQTEWQSEPERWQRLFLGPFDGILNSSLTCQSCSSQI
SNKFESFDCLPLSPVLSNSYTIRVGCTLVDCLKQFIVAEHIENYHCSHCWHNAAIKYLTL
MEGNKVELGKLKRCSDEEFCECRKIYNLENLPWLNRFSRALKQLSIARSPRILCIQLKRV
HMNNFGESFKLQGHISFPLTLDVSSFMTTRPGVNIQKEDVQSLPLNLQCNRINSLPNHSN
LHSEIRTIRFSGIYGESKEQIDADALIDDVVISSTSRQALLNEFPCSSSSENTHSNTQSQ
SIDTVGQNFLYICIHFTLNHEILYILAFFLSSYILWFIQVDASCNSDSQDTCLYQLVSVV
EHFGRAGGGHYTVYRCVRSESSDVSGDQHSMSWFCVSDSQVHSVSVEDVLSAEASLLFYE
RIPNS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaagaagacggtaactctattgtttggtctaactgacaccaacttgacacta
tcctccacaattcgcttagcacttcctaccattgcaaccattgctgttatcacaatagct
ttcaaagaattcaaatcatccaaacgaattattagcttctcaggttttgattcccggctt
ttcattaccgattccgagaaaccgattttgattcccggtttgcaaaatctcgccaataat
tgtttcctcaacgtcgttttgcaggctcttgctagttgtgtttgctttcagagttttctt
gacaatgttattgctgaatatgagactgatgaacaactcgttgaaaatatgcctcttata
ttttctctggcttcattattacaagagctgagctcagttagtaccgaaaaggttatattg
agtccgacaaagttgatgcatgctatgtccagctacattccagattttgatctgacgagc
cagcaggatgctgctgaagcgtttgttcacctaatgtcctctttgagagaagaatctgga
ggttgttatgctccaaagataagttctttagcagacatttttgcttctaataatagaatt
cttactccaatacagacggagtggcaaagtgagccagaaagatggcagcgcctcttcctt
ggaccctttgatggaattcttaatagcagcttaacttgtcaaagctgttcatcccagatc
tcaaataaatttgaaagttttgattgtttgcctctttcacccgtgcttagtaatagttac
actataagagttggttgtacactcgtggattgcctgaagcagttcattgtagctgaacac
attgaaaactaccactgcagccactgttggcataatgctgcaatcaagtatcttaccttg
atggaaggaaacaaggtagaactcggaaaacttaagagatgttctgatgaagaattctgt
gagtgccgaaaaatttataatcttgaaaatctaccatggttaaataggttttcacgtgct
ttgaagcagctaagtattgctcgaagtccaaggattttatgcatccagctgaaaagagtt
cacatgaataattttggagaatcatttaaactacagggccatatttcttttccattgact
ttggacgtgtcctcattcatgacaactagaccaggagtaaatatacagaaagaagatgta
caaagtctgccattaaatctgcagtgtaacagaataaactctttgccaaaccatagcaac
ctgcattctgagataagaacgatcagattcagtggcatttatggagaatcgaaagagcag
atcgatgcagatgctcttattgatgatgtagttatctcctctactagtagacaggcactt
cttaatgaatttccctgttctagctcttcagaaaacactcactcaaacacacagtcgcaa
tccattgacacggttggtcaaaattttctgtatatatgcattcattttacattgaaccat
gaaatcctgtatatccttgcattctttttgagttcttacatattgtggtttatacaggtg
gatgcttcttgtaattcagattctcaagatacttgtttgtatcaacttgtctctgttgtg
gaacattttggaagagcaggaggagggcattacactgtttacagatgtgtgagatcagag
tcctcagatgtctctggtgatcaacattcaatgagctggttttgtgtttcagattctcaa
gtgcattctgtttcagtggaagatgttctttctgccgaggctagcttgcttttctatgag
agaataccaaatagctaa
DBGET
integrated database retrieval system
