Trifolium pratense (red clover): 123918388
Help
Entry
123918388 CDS
T08949
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123918388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123918388
03012 Translation factors [BR:
tpra03012
]
123918388
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123918388
Translation factors [BR:
tpra03012
]
Eukaryotic type
Release factors
123918388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
123918388
NCBI-ProteinID:
XP_045826370
LinkDB
All DBs
Position
LG3:2991618..2999971
Genome browser
AA seq
532 aa
AA seq
DB search
MDLEEDIRSLQLDSAEDINGVVNPEDEKPDVDNFDKMEDEGLLSGNDPKQEVQAQSVEAE
PKAKDKEIPPVQDEEDEHMKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEK
EAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETDTTRFTILDAPGHKSYVPNMIS
GASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWSK
ERLELSLCLYELIWNCKEISYWWCSIRYDEIESKMVPFLKQSGYNVKKDVSFLPISGLMG
LNIKTRLDKSHCSWWDGPCLFESLDSIEVPMGDPQSPFRMPIIDKFKDMGTVVMGKVESG
TIKDGDSLLIMPNKDHVKVVAIYIDEKRVNIAGPGENLRVRLSGIEEEDLLSGFVLSSAA
NPISTVTEFVAQLQILELLDNAIFTAGYKAVLHVHSVVEECEIVELLEQIDPKTRKPIKK
KVLFVKNGAIVLCRVQVNNVICVEKFSDFPQLGRFTLRTEGKTVAVGKITAI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgaggaggacattcgttctttacagcttgactcagcagaagacattaatggg
gtggtaaatccagaggatgaaaagccagatgttgataattttgataagatggaggatgaa
ggtttgttgtcaggaaatgatccaaagcaggaggttcaggctcagtctgttgaggccgag
ccaaaagcgaaagataaggaaattcctcccgttcaagatgaagaagatgagcacatgaag
aaaaggcacttgaatgttgtgtttattgggcatgttgatgctggcaaatctacaactgga
ggtcagatacttttcctcagtggtcaggttgatgatcgaactatccaaaaatatgagaaa
gaagctaaggacaaaagtagagaaagctggtacatggcctatattatggacacaaacgag
gaggagagagttaagggaaagactgttgaagttggaagagcacattttgagacagacact
acaaggttcaccattttggatgcacctggccacaagagctatgttcctaatatgatcagt
ggtgcatctcaagctgatattggagtgttggtaatttctgctcggaagggagagtttgaa
actggatatgagagaggtggacaaactcgtgaacatgtccagcttgcaaaaacattgggt
gtgactaagctgcttgtggttgtcaataaaatggatgatcctacagtaaactggtcaaaa
gaaaggttagagctctctctctgcctttatgagcttatctggaattgtaaagagatatct
tactggtggtgttctattaggtatgatgaaattgagtcaaagatggttccatttctaaag
caatcaggatacaatgtaaagaaagatgtctcatttttaccaatatcggggctcatgggt
ttaaacataaaaacaagattggataaaagtcattgttcatggtgggatggaccttgctta
tttgaatcccttgatagtattgaagttcctatgggagatccccaaagtcctttcaggatg
cctataattgacaaattcaaagacatgggaactgttgttatgggcaaagttgaatctggt
actattaaggatggagattcccttttgatcatgccaaataaggatcatgtaaaagttgtt
gctatatatatcgatgaaaagcgggttaacatcgctggacctggtgaaaatttacgggtt
cgattatctggcattgaagaagaagacttattgtctgggttcgtcctgtctagtgctgca
aatccaatatcaacagttactgagtttgttgctcagttgcagatccttgaattactggac
aatgctatttttactgctggatacaaagctgttctgcatgtccactctgtagttgaggaa
tgtgagattgttgagctattggaacaaattgatccaaagacaaggaagcctataaaaaag
aaagttctctttgtaaagaatggcgctattgtattatgccgtgttcaggttaataacgtg
atatgtgttgagaagttctctgattttccacaactagggaggttcactcttcgcactgaa
ggaaaaactgttgccgtggggaaaatcactgctatctaa
DBGET
integrated database retrieval system
