Trifolium pratense (red clover): 123918416
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Entry
123918416 CDS
T08949
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2-like
KO
K11096
small nuclear ribonucleoprotein D2
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123918416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123918416
03032 DNA replication proteins [BR:
tpra03032
]
123918416
Spliceosome [BR:
tpra03041
]
Complex A
U1 snRNP components
Sm proteins
123918416
U2 snRNP components
123918416
Complex B
U1 snRNP components
123918416
U4/U6.U5 tri-snRNP components
123918416
Complex C
U2 snRNP components
123918416
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
123918416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
123918416
NCBI-ProteinID:
XP_045826422
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All DBs
Position
LG3:3223944..3226981
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AA seq
108 aa
AA seq
DB search
MSRPMEEDAVAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV
LENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgagccggccaatggaggaagatgctgtggctaagaatgaggaagaggaattcaacaca
ggaccactatctgtactcatgatgagtgtgaagaataacacacaggtactgataaattgc
cgcaacaacaagaagcttctaggccgtgtcagggcttttgataggcactgcaatatggtt
cttgaaaatgtcagggaaatgtggactgaggtgcctaagactggtaaaggaaagaaaaag
gctcaaccagtcaacaaggacagatttatcagcaaaatgttcctccgtggtgattcagtc
atcattgttcttaggaaccccaaataa
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