Trifolium pratense (red clover): 123918417
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Entry
123918417 CDS
T08949
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2-like
KO
K11096
small nuclear ribonucleoprotein D2
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123918417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123918417
03032 DNA replication proteins [BR:
tpra03032
]
123918417
Spliceosome [BR:
tpra03041
]
Complex A
U1 snRNP components
Sm proteins
123918417
U2 snRNP components
123918417
Complex B
U1 snRNP components
123918417
U4/U6.U5 tri-snRNP components
123918417
Complex C
U2 snRNP components
123918417
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
123918417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
123918417
NCBI-ProteinID:
XP_045826424
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All DBs
Position
LG3:3229052..3230938
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AA seq
137 aa
AA seq
DB search
MGSKVCRQRSNKFLKMLVSIILNVFLPNELFRPMEEDAVAKNEEEEFNTGPLSVLMMSVK
NNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFIS
KMFLRGDSVIIVLRNPK
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaaggtgtgtcggcagcgaagcaacaagttcttgaaaatgttagtttctatt
atactgaatgtttttcttcctaatgagctcttccggccaatggaggaagatgctgtggct
aagaatgaggaagaggaattcaacacaggaccactatctgtactcatgatgagtgtgaag
aataacacacaggtactgataaattgccgcaacaacaagaagcttctaggccgtgtcagg
gcttttgataggcattgcaatatggttcttgaaaatgtcagggaaatgtggactgaggtg
cctaagactggtaaaggaaagaaaaaggctcaaccagtcaacaaggacagatttatcagc
aaaatgttcctccgtggtgattcagtcatcattgttcttaggaaccccaaataa
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