Trifolium pratense (red clover): 123918559
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Entry
123918559 CDS
T08949
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123918559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123918559
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123918559
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
U-box type E3
123918559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
zf-RING_UBOX
zf-C3HC4_4
Neurochondrin
zf-Nse
Arm_2
KAP
zf-C3HC4
Mrr_N
zf-rbx1
MCAfunc
Motif
Other DBs
NCBI-GeneID:
123918559
NCBI-ProteinID:
XP_045826593
LinkDB
All DBs
Position
LG3:complement(19021117..19026465)
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AA seq
662 aa
AA seq
DB search
MEIEKVNSIIDLVNEIANISDFRPMVKKQYCNLARRLKLLIPLFEEIRDTKDSIPIDTSK
AVVLFKEALESARELLRFGSEGSKIYMILERDQIMNSFYEVTARLEQSLDGISYDKLDIS
DEVKEQVELVLTQFRRAKGRVDEPDAKLYEDMSSLYNNSSDTATDPAILSRLADKLQLMG
IADLTQESLALHEMVAASSGDPGARIEKMSMLLKKIKDHVQIENLVKDDTAVAKGVSSGF
YGLEENDKNHPVPAIPSDFKCPISLELMMDPVIVSTGQTYERSCIEKWLKDGHGTCPKTQ
QTLTSTVLTPNYVLRSLIEQWCEANGIEPPKRPSTSEPSKSASACSPAERSKIESLIQKL
TSGGPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSVPDSRTQEHAVTALLNL
SIYESNKGNIVSSGAVPGIVHVLKRGSMEARENAAATLFSLSVIDENKVTIGSSGAISPL
VTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMRLLTEPGGGMVDEALAIL
AILSSHPEGKAAIGSAEAVPVLVEFIGTGSPRNKENAAAVLVHLCSGDRQYISQAQELGV
MAPLLELAQNGTDRGKRKATQLIERMSRIREQEQQEVQTQTEHQAQNDDIQPPLIINLDI
DT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgagaaagtaaactcaataattgacctagtgaatgagatagctaatatctca
gatttcagacctatggtcaagaaacagtattgtaatttagcacgaaggttgaagctgttg
atccctttatttgaagagattagggatacgaaagattcaattccgattgatacttcaaaa
gctgtggttttgttcaaagaagctcttgaatcagctagagaacttctcagatttggaagt
gaaggaagcaagatttacatgatccttgagagggaccagattatgaatagtttctacgag
gtgacagctcgattggaacaatcactggatggaatttcctacgataagcttgacatatcc
gatgaagttaaagagcaggttgaactggttcttactcagttcagaagagccaaaggcaga
gttgatgaaccagatgccaagttgtatgaagatatgtcatccctatacaacaatagcagt
gacacagctacagatccagctattctaagtcgattagcagacaaattgcagttgatggga
atagccgatcttacacaagaatcacttgctttgcatgagatggtggcagcaagtagtgga
gatccaggggcacgcatcgagaagatgtcaatgttattgaagaagataaaggatcatgtg
caaatagaaaacctagtcaaggatgataccgcagtagcaaaaggtgtttcttcaggattt
tacggactagaggaaaatgataagaatcatccggtccctgctatccctagtgattttaaa
tgtccgatttccttggaattgatgatggatcctgtcattgtttcaacaggacagacatat
gagcgttcctgtatcgagaagtggttgaaagacgggcatgggacgtgccctaaaacacag
cagactctcaccagtactgttcttacacccaactatgtcttacgaagtctaatagaacaa
tggtgtgaagccaatggcatagagccaccaaaacgacccagcacttctgagcctagtaaa
tcagcatcagcctgctccccagctgagcgaagtaagattgaaagtcttatccaaaagcta
acatctggtggtcctgaagaccagagatcagctgcaggtgagatccgccttcttgcaaaa
cgcaatgcagataaccgtgtagctattgctgaagctggcgcaatacctctccttgttggt
ctcctctccgtgcctgactcccgtactcaagagcatgctgttacagcgcttctgaatctc
tccatatatgagagtaacaaaggaaacattgtttcttcaggagcagttccaggcatagtt
catgtgctgaagaggggaagcatggaagctcgggaaaacgcagcagcaacacttttcagc
ctttcagttattgatgaaaataaggttacaattggttcttcaggagccatatcaccacta
gtgacactgctgagtgaaggtacccaaaggggtaagaaagacgctgcaacagcactcttc
aatttgtgcatttaccagggaaacaagggaaaggcagtgagggctggtgttattcccacg
ctgatgcgattactgacagaacctggcgggggaatggtggatgaagcattggccatttta
gccattttgtctagtcatccagaagggaaggctgccattggatctgccgaggcagtgccg
gttttggtagagtttatcgggactggatcaccaaggaacaaagagaacgcagctgctgtt
ttagttcatctttgttctggtgatcgacagtatatatcacaggcacaagagctaggggtg
atggctccattgttggaattggcacaaaatggtaccgacagaggcaaaagaaaggcaaca
caattgatagagcgaatgagcaggatccgcgagcaggagcagcaggaagttcagacgcaa
accgaacatcaagctcaaaacgatgatatccaaccacctttgatcattaacctcgatatt
gacacctga
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