Trifolium pratense (red clover): 123918588
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Entry
123918588 CDS
T08949
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1-like
KO
K14016
ubiquitin fusion degradation protein 1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123918588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123918588
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123918588
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
123918588
NCBI-ProteinID:
XP_045826618
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Position
LG3:19274729..19276130
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AA seq
307 aa
AA seq
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MQYAWQIEVFEHVYRCFSVSSLGRPNLENGDKIIMPSSALDSLVRLEIEYPMLFELNNPS
AERTTHCGVLEFTADEGIAYLPNWMMEDMLIEEGGIVSLKSTSLVKGKFVKFQPHSKEFL
DITNPKVMLEKSLRSYSCLTTGRTIMIPYNDKKYYIDVVETKPTPAISIIETDCEVDFAP
PLDYKEPEKPLPSDLSDKEPPQVEEETATKTPAVIPFSGFGRRLGGKPSTQSVEQTSTPI
LKQQQTENTMSSNRTSGKLVFGSKANAPNVQTQPKASPKSTSQDSSSKKTDTPQFQAFSG
KKYSLRD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgcttggcagattgaagtctttgaacatgtttaccgctgtttctctgtctcg
tctcttggaaggccaaatcttgaaaacggtgataaaattatcatgccgtcttcagcacta
gatagccttgtgcgtttggaaatagaatatccaatgctatttgaactgaacaatccttct
gctgaaagaactactcactgtggagtcttagaattcactgctgatgaggggattgcatac
ttaccaaattggatgatggaagatatgctcatagaggaaggaggcattgtgtctctgaaa
agcacaagtcttgtgaagggaaagtttgtcaagttccaacctcactccaaagagtttttg
gatatcactaatccaaaagtcatgttagaaaaatcattgaggagttactcatgtttaaca
accggccgcactataatgattccatataacgacaaaaagtactacattgatgtggtcgaa
acgaaacctactccagcaatttctataattgaaacagattgtgaggttgattttgctcca
cctcttgattacaaagaacctgagaagcccttgccatctgatttgtctgataaggaacct
ccgcaagttgaagaagagactgcaacaaagactcccgcggtgattccttttagtggtttt
ggaaggcgtttgggtggaaaaccatcgacacaatcagttgagcaaacttccactccaatt
ctcaagcagcaacaaactgaaaataccatgagttccaacagaacttctggaaagcttgtt
tttggatcaaaagctaatgcacctaatgttcaaacacagccaaaagcttctccaaaaagt
acaagtcaagattcatcatctaagaagacagacaccccacaattccaagctttctcagga
aagaagtattcattaagagactga
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