Trifolium pratense (red clover): 123918630
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Entry
123918630 CDS
T08949
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123918630
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123918630
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123918630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
123918630
NCBI-ProteinID:
XP_045826669
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Position
LG1:8065006..8069511
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AA seq
440 aa
AA seq
DB search
MGTSNLRLFFFSLLSFCAMAAAKVVLIGNNTTLSFDDIEANFSPSVKGSGEYGALFLAEP
LDACTQLTNKAIQLPNDSSPFVLMIRGGCSFEDKVRVAQNAGYKAAIVYDNEDGGILVAM
AGNSAGIRIHAVFVSKASGEILMKYTGLTNVETWLIPTFENSAWSIMAISFISLLAMSAV
LATCFFVRRHRIRRGPRGSSHVREFHGMSSRLVKAMPSLIFTSALEDNCTSRTCAICLED
YCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLSDPPPSESTPLLSSTPS
SVTSSFVSSMRSSFASSSAIQIVSQSPSASRNHSLASTPYMQPSLRSYRQSPSLSVSRSS
VDLRNASQRSLASHMNSPRSIGYPSLSSLNSRYMSSHMPSPSNGSVSFLASSSHQQHPLR
YSESASSFSPFASANSLPDC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtacctcaaatcttcgcttatttttcttctctctgctgagtttctgtgccatggcg
gctgctaaggtcgtgctgattgggaacaacaccactctttcattcgatgatattgaagct
aatttctctccgtcagttaaagggtctggagaatatggagccttattcttggcagagccg
cttgatgcatgtacacaacttacaaataaagctatacaacttcccaatgatagttcacct
tttgttttgatgattagaggagggtgtagctttgaggacaaggttagggtcgcacaaaat
gctggctacaaagctgcaattgtctatgacaatgaagatggtggcatcctggttgcaatg
gcaggaaattctgctggtattagaatacatgcggtatttgtatcaaaagcttcgggtgaa
atactaatgaaatacactggtttgactaatgtggaaacatggctcattccaacttttgaa
aactcagcatggtctatcatggcgatttcatttatttccctgctagctatgtctgcagtg
ctggccacttgtttcttcgtccgcaggcatcgcataagaagagggcctcgaggttcttct
catgtccgtgaatttcatggtatgagtagtcgtctagtgaaagcaatgccaagtttgatt
tttacttctgctttggaagataactgcacatcaagaacatgtgctatctgccttgaagac
tattgcgttggagagaaactcaggattctgccctgctgtcacaagtttcatgctgcctgt
gtggattcttggcttacttcgtggagaaccttttgcccagtttgcaagcgtgatgcaaga
acaggtctgtctgatccaccaccttcagaatccacacctctgctgtcatcaacgccgtca
tctgtgacatcttctttcgtgtcttctatgaggtcatcgtttgcttcttcttctgcaata
caaattgtttcacagtcgccgtctgcttctcgtaaccactctttagctagtaccccttac
atgcaaccatctctaaggtcctaccgccagtccccctccctgagcgtcagccgtagctcc
gtagatcttaggaatgcatcccaaagatctctagcttcacacatgaattcaccgcgttcc
atcggttatccatctttatcatctcttaactcaaggtacatgtcttcacacatgccaagt
ccaagcaatggttcagttagtttcctcgcttcatccagtcaccagcaacatccactccgt
tatagcgagtcagcgtcaagcttctcgccatttgcgtctgccaactcccttccggattgt
tga
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