KEGG   Trifolium pratense (red clover): 123918777
Entry
123918777         CDS       T08949                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03020  RNA polymerase
tpra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123918777
  09124 Replication and repair
   03420 Nucleotide excision repair
    123918777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpra03021]
    123918777
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123918777
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123918777
Transcription machinery [BR:tpra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     123918777
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     123918777
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123918777
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 123918777
NCBI-ProteinID: XP_045826880
LinkDB
Position
LG3:complement(13537424..13540997)
AA seq 176 aa
MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTV
NT seq 531 nt   +upstreamnt  +downstreamnt
atgtttttccacattgtgttggagcgaaacatgcaacttcatccacgctactttggacgt
aatcttcgcgataatcttgtttccaagctaatgaaagatgtcgaaggcacttgcagtggc
cgacatggatttgtggtggcagtgacaggaattgaaaacatcgggaaagggttaattcgt
gatgggactgggtttgtgacttttccggtgaagtaccaatgtgttgtgtttagaccattt
aagggagagattttagaagctgttgttactatggtgaacaagatgggattttttgctgaa
gctggaccggttcaaatctttgtttccaatcatctgattccggatgatatggaattccag
tctggagacatgcctaactatactacttcagatggatcagtgaaaatccagaaagatagt
gaagtgagactgaagataattgggactcgagtggatgccactgaaattttctgcataggt
accataaaagatgatttcttgggagtaatcaacgaccctacaacagtttaa

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