KEGG   Trifolium pratense (red clover): 123918963
Entry
123918963         CDS       T08949                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03013  Nucleocytoplasmic transport
tpra04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123918963
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123918963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123918963
   04131 Membrane trafficking [BR:tpra04131]
    123918963
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123918963
Membrane trafficking [BR:tpra04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    123918963
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    123918963
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    123918963
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 123918963
NCBI-ProteinID: XP_045827121
LinkDB
Position
LG3:45563406..45565513
AA seq 301 aa
MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNSASQHLATLTGHQGPVWE
VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWVQAHVFDDHKSSVNSVAWAPHELGLCLA
CGSSDGNISIFTARADGGWDTSRIDQAHPVGVTSVSWAPAMAPGALVGSGLLDPVQKLCS
GGCDNTVKVWKLSNGQWKMDCFPALQMHNDWVRDVAWAPNLGLPKSTIASASQDGKAIIW
TVGKEGDHWEGRVLNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccttcgcagaaggttgaaacgggtcatcaagacacggtccatgatgttgcaatggat
tactatggaaagaggctggcaacagcttcttcggatcacacaattaagataatcggtgtg
agcaattcagcctctcagcatctagcaactttgactggtcaccaaggacctgtttgggag
gtcgcgtgggctcaccctaagtttggttctctgcttgcttcgtgttcctatgatgggcgt
gtcattctttggaaggagggtaaccaaaatgaatgggtccaagctcatgtttttgatgac
cataagtcatctgtgaattcagttgcttgggcacctcacgaattgggtctctgcttggct
tgtggttcgtctgatgggaatatatctatattcactgcaagagcagatggtggatgggac
acctcaaggattgatcaggctcacccagtaggtgtcacttctgtgtcttgggctcctgca
atggcaccgggggctcttgttggttcagggttacttgatccggtgcagaagctttgctcc
ggtggttgtgataatactgttaaggtgtggaagctgagcaacggacagtggaagatggat
tgctttcctgcacttcagatgcataatgattgggttcgtgatgttgcttgggcacctaat
ttgggacttccgaaatcaaccatcgctagtgcatcacaggatggtaaagcgatcatatgg
actgtaggcaaagaaggggatcattgggaaggcagggttttgaatgatttcaagacccct
gtttggagggtgtcatggtcattgacaggaaatatactggctgttgctgatggaaacaac
aatgtgacattatggaaagaagcagtagatggggaatggcaacaggtgacaacagtggag
ccatag

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