Trifolium pratense (red clover): 123919637
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Entry
123919637 CDS
T08949
Name
(RefSeq) WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123919637
03036 Chromosome and associated proteins [BR:
tpra03036
]
123919637
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123919637
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123919637
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123919637
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
123919637
DSBR (double strand breaks repair)
Other DSBR factors
Others
123919637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
123919637
NCBI-ProteinID:
XP_045827554
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All DBs
Position
LG4:41352338..41354928
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AA seq
468 aa
AA seq
DB search
MAPPKLTDYERKRLENIRRNNEMMAALKVQSKASQLSNITKVVTKSYNVKSEKKPKTETP
IVIRRSLRTRGIPPDSKGLDLYANSDSNAVTHNSPNKNDDFVQTLGPIPMKDAYKGVDDS
DRSFIESLVRISDKEVYEEELNGHAKKMKIECSLELESLSLDPENIARVVPGRITQMGFC
PSNDVKMVVAGNKFGDIGFWNVGQNEIFLYHPHQAPISGILFQPHCLSKIYTSCYDGLVR
VMDAEKEIFDMVYNSDTCIYALSQPKNEANCLYFAEGSGGLTVWDNRIGKSSSHWDLHES
RINTIDFNPESPHIVATSSSDATACTWDLRCIGGTNHTALRTFTHKRSVQSAYFSPSGCS
LATTSLDNTIGIYSGVNLEDQTSVYHDNHTGRWISTFRAIWGWDNSYLFIGNMKRGVDVV
STVQRATVKTLQSPHISAIPCRFYAHPYEVGMLAGATSGGQVYIWTSS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccaaaactaactgattatgaacgcaaacgactcgaaaacattcgccgcaac
aatgaaatgatggccgctctcaaagtccaatccaaagcctctcaactttccaacattacc
aaggttgttaccaaatcatacaatgtaaaatcggagaagaaaccgaaaaccgaaacccca
attgtaatcagacgctcacttcgaacaagaggtattccaccagattccaaaggtttagat
ttatatgctaattcagattccaacgctgttactcacaattcccccaataaaaatgatgat
tttgttcaaactttgggtcctattcccatgaaggatgcttataaaggcgtcgatgattct
gatcgttctttcattgaatcacttgttcgtatatcggacaaggaagtctatgaagaagaa
cttaatgggcatgcaaaaaagatgaaaattgagtgttcacttgagttggaatctttgtct
ttggatcctgaaaatatagcaagagttgttcctggaaggataactcaaatggggttttgc
ccttctaatgatgttaagatggtagtggcgggtaacaaatttggggatattgggttctgg
aatgttggacaaaatgagatttttttataccatccacatcaggctcccatttctgggatc
ttgtttcaaccacattgcttgtcaaagatatatacaagttgttatgatggacttgttcgg
gtgatggatgctgagaaggaaatctttgatatggtatacaacagtgatacatgtatatat
gctctctcgcagccaaagaatgaggcaaactgtttgtattttgctgagggatcagggggt
ttaactgtctgggataacaggatagggaaaagttcatcccactgggatttgcatgaaagt
aggattaatacaatagatttcaaccctgaaagccctcatattgtagctactagttcctct
gatgcaactgcatgcacctgggatttgagatgtattggcgggactaaccacacagccttg
aggacatttactcacaaaaggtctgtgcaatctgcctatttctctccttctggatgcagc
cttgccactacaagcctggacaacacaattggtatatacagtggagttaacttggaggat
caaacttcggtttatcatgataatcatactggaagatggatttcgactttcagagcaata
tggggctgggataattcatacctcttcattgggaatatgaaaagaggagtcgacgttgtc
tcaacagttcaaagggcaacagtaaagactctacaaagcccacacatatctgcaattcca
tgcagattttatgcacacccttatgaggttggaatgctagcaggagctacaagtggaggt
caggtctatatttggacatcaagctaa
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