Trifolium pratense (red clover): 123919716
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Entry
123919716 CDS
T08949
Name
(RefSeq) amino acid transporter AVT1C
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123919716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123919716
Transporters [BR:
tpra02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
123919716
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
DUF8268
Motif
Other DBs
NCBI-GeneID:
123919716
NCBI-ProteinID:
XP_045827665
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All DBs
Position
LG1:complement(9058088..9062847)
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AA seq
541 aa
AA seq
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MNNSVVSENSFIIESDEEDDKDFNKDDDGNDSDSSNYSNENPPQRIQSSYNPSWPQSYRQ
SIDLYSSVPSPNIGFLGTSSLSRLSSSFLSTSLTRRHTPEVLPSVTKPLIQTIEDEPPQR
RSSRALLPPLSRKSSLLKTESKVCHEVPSRHCSYGQAVLNGINVLCGVGILSTPYAAKEG
GWVGLSILFIFGIISFYTGLLLRSCLDSEPGLETYPDIGQAAFGTTGRIAISIVLYVELY
GCCIEYIILEGDNLASLFPNAYLNLGGIELSPQTLFAVVAALAVLPTVWLRDLSILSYIS
AGGVIASVLVVLCLLWIGVEDVGFQRSGTTLNLATLPVAIGLYGYCYSGHAVFPNIYTSM
ANPNQFPAVLVACFGVCTLLYAGGAFMGYKMFGDDTLSQFTLNLPQDLVATKIAVWTTVV
NPFTKYALTISPVAMSLEELIPANHAKSYLYSIFIRTGLVFSTLVIGLSVPFFGLVMSLI
GSLLTMLVTLILPCVCYLRILRGKVTRLQRGLCIGIIIVGAVCSSVGTYSALAEIVKSLS
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaataactcagtagtttcagagaacagttttattattgaaagtgatgaagaagatgat
aaggattttaacaaagatgatgatggaaatgattctgattcttcaaattactccaatgaa
aatccaccacaaaggatacaaagttcttataacccttcatggcctcagagttacaggcaa
tctattgatctatacagtagtgtaccatcaccaaatattggatttctaggaacttcttca
ttgtcaagattaagcagttccttcctttctacatctttaacaaggaggcacactcctgaa
gttcttccttcggttacaaaacctcttatacagacaatagaagatgagccgccacaaaga
cgcagctctcgcgccttgcttcctcccctttctagaaagtcttctttgcttaagacagaa
tccaaggtttgtcatgaagttccttctcgacactgctcttacggacaggctgtgcttaat
ggcataaacgttctttgtggagtaggaatcctttcaaccccttatgctgctaaagaaggt
ggatgggttggactttccattttgttcatttttggaatcatttccttttataccggattg
ctcttgcgttcttgcttggacagcgaacctggccttgaaacataccctgacattggccaa
gctgcttttggtactaccggacgtatcgctatttcaatagtactgtacgtcgaattatat
ggctgttgcattgaatatataattttggagggagacaacttggcttctttgtttccaaat
gcatacttaaatttaggtggaatcgagttgagtccgcaaacgctctttgctgtggttgct
gccttggctgttcttcctacagtttggctccgtgacctaagcattcttagttacatctca
gctggtggagttatagcatccgttttagtggttctgtgcttgttatggatcggcgtagaa
gacgttggctttcaacgctcagggacaacactcaatcttgcaactcttccggtagctatt
ggtctttacggttactgttattccggtcatgctgttttcccaaatatttatacttccatg
gcaaatccaaaccagtttcctgcagtactagtagcatgttttggagtttgtaccttacta
tatgctggcggtgcttttatgggatacaaaatgtttggagacgatactctctctcaattc
actcttaacctgccacaagacttggttgcaaccaagattgctgtctggactacggtggtt
aatccatttaccaagtatgcgttgactatatctccagtggcaatgagtctcgaagagttg
ataccggcaaaccatgcaaagtcttacctatattcaattttcatcagaacaggccttgta
ttttctacccttgttattggtctctcagttcccttttttggtttggttatgtccttaatt
ggatctttacttacaatgcttgtaactttgatattaccatgtgtttgttacctaagaatc
ttgcggggtaaggtcacgcgattacagagaggactttgcattggaattattatagtagga
gctgtgtgttcttcggttggaacgtactcagccctcgccgagattgttaagagtttgagt
ggatga
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