Trifolium pratense (red clover): 123919790
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Entry
123919790 CDS
T08949
Name
(RefSeq) U-box domain-containing protein 14
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123919790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123919790
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123919790
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
U-box type E3
123919790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
KAP
HEAT_EZ
zf-Nse
MLKL_N
zf-C3HC4_4
Arm_2
MCAfunc
zf-C3HC4_2
zf-C3HC4
Arg_tRNA_synt_N
DUF4349
V-ATPase_H_C
zf-RING_2
TOR1L1_N
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
123919790
NCBI-ProteinID:
XP_045827752
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All DBs
Position
LG1:9156098..9159879
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AA seq
630 aa
AA seq
DB search
MGGSENSKAMVVGHLADSIREISGLPECQNVCKKMYGNLIRRVKLLSPLFEELKDCDESL
SDEQLQAFESLRVALDFTMILLKSVNHGSKLYQALRRNDTADKFQQITEKIDAALSDISY
NKLEISEEVQEQIELVHAQFKRAKAQTEFADLQLDLDMAVAQKEKDPDPAILKRLSEKLQ
LRTINDLKKESSELHELVITSDGELGDSFEAVSSLLRKLKDCVLIDNPEVASYESEQVSI
KHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHRTCPKTQQTLLHTAL
TPNYVLKSLIGLWCESNGVELPKKQGSCKTKKSGTSLSDCDRTAIKALLDKLTSNDIEQQ
RAAAGELRLLAKRNADNRVCIAEAGAIPLLVELLSSTDPRTQEHAVTALLNLSINESNKG
TIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVLDENKVAIGAAGAIPALIKLLCEGT
PRGKKDAATAIFNLCIYQGNKARAVKAGIVAALIRFMKDAGGGMVDEALAIMAILASHHE
GRIAITQADPIPILVEIIRTGSPRNRENAAAVLWSVCTGDFLQLKLAKEHGAVEALQGLS
ENGTDRAKRKAGSILELLQRMEGEDSMQNS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggagcgagaattcaaaggctatggttgtgggtcatttggctgattccatcagg
gagatttctgggttgccagaatgtcaaaacgtttgcaagaagatgtatgggaatttgatt
cgtagggtcaaacttttgagccctttgtttgaggaattgaaggactgtgatgagtctctt
agtgatgaacagcttcaagcttttgaatctttaagggttgctttggattttactatgatc
cttctaaagtctgttaaccatgggagtaagctttatcaggctttgcggaggaatgacaca
gctgataagttccaacaaataaccgaaaaaattgacgctgcattgagtgatatttcatac
aacaaacttgagatatcagaggaagttcaagaacagattgaactggttcatgctcagttc
aaaagagccaaagctcaaacagaattcgctgatttacaactagacttagatatggcagta
gctcagaaagaaaaagaccctgatcctgccatactcaaacgactttccgagaagttgcag
ctgaggactataaatgatctaaagaaagaatctagtgaactacacgaattggtcataaca
agtgatggagaactaggtgacagttttgaagcggtctcatcccttcttaggaaactgaag
gattgcgtgctcatagataatcccgaggttgcttcctatgagagtgagcaagtgtcaatt
aaacatcggtctcctgtaatcccagatgactttcgatgtcctatatctcttgaactaatg
aaagatcctgtaattgtctctaccggtcagacatatgaaagatcctgcattcaaaaatgg
cttgatgctggtcacagaacctgcccgaaaacacagcaaacacttttgcatacagccctt
actcctaactatgttttgaagagtctgattggtttatggtgtgaaagcaatggtgttgaa
ctaccaaagaagcaaggaagctgtaaaacaaagaaatctggaacaagtctttccgattgt
gacagaactgctatcaaagctttattagataaactaacaagcaacgatattgaacagcaa
agggcagctgctggtgagctccggttgctggccaagaggaatgcagataacagagtatgt
atcgccgaggcaggagcaataccgcttctcgtagagttattgtcttccacagatcctcga
actcaggagcatgctgttacagcacttctcaatctttccatcaacgagagtaacaaagga
actatagtaaatgcaggagctataccggatattgtagatgtactgaaaaacggcagcatg
gaagctagagaaaacgcagcggcaactcttttcagcttatccgtcctagacgagaacaaa
gtcgcgataggtgcagcaggagctatcccggctcttataaagctactttgtgaaggtaca
ccgagaggcaaaaaagatgctgctactgcaatatttaatctttgtatttatcagggaaac
aaagctagagctgtaaaagcggggatagttgctgcattgatacggtttatgaaggatgcg
ggaggtgggatggttgacgaagcgctagccataatggcaatccttgcaagccatcacgaa
ggcaggatagcaatcactcaggccgatccaatccctattttagttgagattatacgaact
ggatcaccgcgtaaccgggagaatgctgctgctgttttgtggtcagtatgcacgggagat
ttcctgcaattgaaactagcaaaggaacatggagcagtagaagcacttcagggattatca
gaaaatggaactgatagagctaagagaaaagctggaagtatattagagctgctacagcga
atggaaggggaggatagtatgcaaaattcctag
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