Trifolium pratense (red clover): 123919827
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Entry
123919827 CDS
T08949
Name
(RefSeq) neutral ceramidase 1-like
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00600
Sphingolipid metabolism
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
123919827
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
123919827
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
123919827
NCBI-ProteinID:
XP_045827789
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Position
LG4:2862090..2868074
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AA seq
763 aa
AA seq
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MRIIWTFLLLLIVLLKSDVAYCDYLVGLGSYDITGPAADVNMMGYANAEQIASGVHFRLR
SRAFIVAEPKGNRVVFVNLDACMASQLVTIKVLERLKARYGDIYTENNVAISGIHTHAGP
GGYLQYVVYIVTSLGFVRQSFDVLVDGIEKTIVQAHENLRPGSIFVNKGEILDAGINRSP
SSYLNNPAAERSKYKYNVDKEMSLLKFIDNEWGPVGSFNWFATHGTSMSRTNSLISGDNK
GAAARFMEDWFERKGSVRTDSAEFESDEGLPRRISNIIPTLHDNHHELLELAASFQSPPG
RPATKTSSVARRVRGALRQVNKPRFVSAFCQSNCGDVSPNVLGAFCTDTGLPCDFNHSTC
GGKNELCYGRGPGYPDEFESTRIIGERQFKKAVELFNGASEQIKGKVDFRHTYIDFSKLE
VNVSSNGASKVVKTCPAAMGFGFAAGTTDGPGAFDFRQGDDQGNPFWKLVRNLLKTPDEE
QIACQQPKPILLDTGEMKLPYDWAPSILPIQILRIGQFVILSVPGEFTTMAGRRLRDVVK
TVLSGDKGLGSNVHVVIAGLTNTYSQYVTTYEEYEVQRYEGASTLYGPHTLSAYIQEFKK
LAHALISGLPVESGPQPPDLLDKQIGLLTPVVMDATPLGASFGDCSSDVPKNSTFKRGDT
VSVTFWSACPRNDLMTEGTFSLVEYLQGKDTWVPAYDDDDFCVRFKWSRPFKLSTHSKAA
IEWRIPQDVAPGVYRIKHFGAAKGLFGSIRHFTGSSSAFVVTN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagaattatttggacatttttgttgctacttatagtgctattgaagagtgatgttgca
tattgtgattacttggttggacttggaagctatgacattactggtcctgctgctgatgtt
aacatgatggggtatgctaatgcagaacagattgcatctggggttcacttcagattgcgg
tctcgtgcttttattgtagctgagcctaagggtaatagggttgtgtttgttaatcttgat
gcttgcatggcttcacaacttgttactatcaaagtacttgagaggcttaaagctagatat
ggtgacatatatacagaaaataatgtagctattagtggaattcacacccacgctggcccc
gggggttatctccagtatgttgtatatattgtaacatctcttggatttgttcgccagtca
tttgatgtcctagttgatggcattgagaaaaccatcgtccaggcccatgaaaatctccgc
ccaggatcaatttttgtcaataagggagagattttagatgctggtattaatcgcagtcct
agcagttatctcaacaatcctgctgcagagagaagcaaatacaagtataatgttgataaa
gaaatgtctcttttgaagtttattgataatgaatggggtcctgtgggaagcttcaattgg
tttgctactcatggaacttcaatgagtcgtacaaactcattaattagcggggataataag
ggtgctgctgcacggtttatggaagactggtttgagcgaaaaggttctgtaagaacggat
tctgctgaatttgaaagtgacgaaggcttacctcgaagaatttcaaacataattcccact
cttcatgataatcatcatgaattactggaacttgctgcctcattccaatctcctcccggt
agaccagcaaccaaaacttcaagtgttgcgagacgtgtgagaggtgcccttaggcaagtt
aacaaacctagatttgtatctgcattttgtcaatcaaattgtggtgatgttagtccaaat
gtacttggagccttttgtacagacaccggactaccttgtgacttcaatcacagcacatgt
ggagggaagaatgagttatgctacggccgaggacctggttatccagatgaatttgaaagt
acacgcattataggggagagacagtttaaaaaagcagtggagctattcaatggagcatcc
gaacagattaaaggaaaggtggattttcgacatacctacatagatttctccaagcttgag
gtaaatgtttctagcaatggtgcttctaaggtagtaaagacatgccctgctgcaatggga
tttggctttgctgctggaacaactgatggacctggagcatttgattttaggcaaggtgat
gatcaggggaatcctttctggaaactggtccgcaacttactgaaaacgccagacgaggaa
caaatagcatgtcagcaaccaaagcctatcttgcttgataccggtgaaatgaagcttccg
tatgattgggctccttcaatacttccaatccagatcctccgaattgggcagtttgttatt
cttagtgtaccaggagaatttacaacaatggctgggaggcggcttcgtgatgtagtgaag
acagtgctaagtggtgacaaaggcttaggtagcaacgttcatgttgttatagcagggctg
accaatacttattcacagtatgtgaccacatatgaggagtacgaggtgcaaagatatgag
ggtgcctccacattgtatggtccgcacacattgagtgcatacattcaggaattcaagaag
cttgcacacgctctcatcagtggcctgcctgtagaatcaggcccgcaacccccagacctt
ctcgacaagcaaataggtttactaacaccagtagtgatggatgcaacccctcttggtgca
agttttggggattgtagctctgatgtgccaaaaaattccacctttaagagaggtgataca
gtgtcggttactttttggtctgcttgtcctcgaaatgaccttatgactgaaggtacattt
tctctcgtggaatatctccaaggaaaggatacttgggttcctgcttatgacgatgatgat
ttctgcgtgcgtttcaagtggtcaaggccattcaaactcagtactcatagtaaagccgca
atagaatggagaataccacaggatgtagctcctggtgtatacagaataaaacattttgga
gctgcaaaggggttgttcgggtcaattcgtcactttacaggttcatctagtgcatttgta
gtaacaaactaa
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