Trifolium pratense (red clover): 123919933
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Entry
123919933 CDS
T08949
Name
(RefSeq) LOW QUALITY PROTEIN: protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123919933
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123919933
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123919933
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Cation_ATPase_C
Motif
Other DBs
NCBI-GeneID:
123919933
NCBI-ProteinID:
XP_045827943
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Position
LG4:17246805..17250726
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AA seq
653 aa
AA seq
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MLDSNPILISTKFVLCDMASEGDLELAKLNGKQVAPRILSRVFSEDYKRVRRRRILDPRG
QIIHQWNKIFLVACLVSLFVDPLFFYLPIVQDEACIDIGIEIEVVLIVIRSILDAFYIIH
IFMRFHIAYVAPSSRVFGRGELVIDSSKIATRYLHKGFFLDFIAALPLPQVLIWIVIPNL
GGSTIANTKNVLRFIIIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLAS
HVLGACWYLLSIERQEACWKSVCKMEESSCKYDFFDCNRVKDSARASWFIASNVTNLCSP
NGLFYQFGIYGDAVTSKVTASAFFNKYFFCLWWGLRNLSSLGQSLLTSTFVGEIMFAIVI
AILGLVLFGLLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELKQSVRKYDQYK
WLATRGVDEESLLKGLPLDLRRDIKRHLCLELVRRVPFFDTMDERMLDAICERLKPALCT
ENTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRP
SMVIPTSTRTVQAISEVEGFALIAEDLKFVASQFRRLHSKQLRNKLRFHSHQWRTWAACF
IQVAWRVRYKKRKVVIELRTNVEYDSYLLINATFLECSDFRSKLVTATLMSEW
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgctagatagtaatccaatcctcattagcactaaatttgttttatgtgacatggcttca
gaaggtgatcttgaattagctaaactcaatggaaaacaagtagctcctagaatattgtca
agagtgttctcagaagattacaagagagtgagaagaagaagaatattagatcctagggga
caaatcattcaccaatggaataagattttcttagtagcatgtttagtttctttgtttgtg
gatcctttattcttttatttgccaatagttcaagatgaagcgtgcattgacattggaata
gaaattgaagttgttctcatagttataagatcaattttggatgctttttacatcattcac
atttttatgaggtttcatatagcttatgttgctccttcttctagggtgtttggaagagga
gaacttgttatagactcttctaagatagctactaggtacttgcataagggttttttcttg
gactttattgctgccctgccccttcctcaggtgttaatttggattgtcatacctaatctt
ggaggttcaaccattgcaaacacaaaaaatgtccttagattcatcatcatattccaatat
ttgccaaggctatttctcatttttccactttcatcacaaattgtaaaagctacaggtgtt
gtgacagaaacagcatgggcaggagctgcttataacctgatgctttacatgttagctagt
catgttttaggggcatgttggtatcttctatcaattgaaagacaagaagcatgctggaag
agtgtctgcaaaatggaggagtcatcttgtaaatatgatttttttgactgcaatagggtt
aaagattccgcgagggcgtcctggtttatagcgagtaatgtcacaaatttatgttcacca
aatggtctcttttatcagtttggtatatatggtgatgcagtgacatccaaagttacagcc
tctgcattctttaataagtacttcttttgtctttggtggggcctaaggaatttgagttct
ttgggacaaagtcttcttactagtacatttgttggagaaataatgtttgccattgttatt
gcaatacttggattggttctttttggattgctcattggtaatatgcagacatacctacaa
tcaacgactgtccggttagaagagtggagggtcaaaagaacagacacggaacaatggatg
catcatagacagctacctcaagaactaaaacaatccgtgcgtaaatatgatcaatataaa
tggctagctacacgaggagtagatgaagaatctcttcttaaaggacttccattggatctt
cgaagagacattaagcgtcacctttgccttgaactagttcgaagagttccattttttgac
acaatggatgagaggatgctagacgcgatatgtgaaagactaaagccagcactatgcaca
gagaacacatatctagttcgcgaaggcgatcctgtaaacgagatgctattcataataagg
gggcatcttgattcctacacaaccaatggagggcgcactggtttcttcaactcatgtcga
attggtccaggtgatttttgtggtgaggagcttttgacatgggcgttggatccacgaccg
agtatggtaattcctacttcgactcgaacggttcaagccatatctgaagtagaaggcttt
gcacttatagcagaagatttgaagtttgttgcatctcagtttagaagattgcatagcaag
caattgaggaacaagttaaggtttcactcacaccaatggagaacatgggctgcttgtttt
atacaagttgcatggagagtaaggtacaagaaaagaaaggtagttattgagttgaggacc
aatgttgaatatgactcatatttactgataaatgcaacatttcttgagtgtagtgatttc
agaagtaaacttgtaacagccactctaatgtcggagtggtag
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