Trifolium pratense (red clover): 123920354
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Entry
123920354 CDS
T08949
Name
(RefSeq) dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123920354
Enzymes [BR:
tpra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
123920354
Ribosome biogenesis [BR:
tpra03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
123920354
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Radical_SAM_2
Fer4_12
zf-C2H2_11
DUF5541
Motif
Other DBs
NCBI-GeneID:
123920354
NCBI-ProteinID:
XP_045828583
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Position
LG4:56270220..56282862
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AA seq
445 aa
AA seq
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MRNWMSMMAMSAVANSTFLPLKTIIPFSLTKTSPFLFSLTTPSRRYLSASALPSISTDHE
FNFSDSSGDGNGVAVSRKSSKVLLKGMTYSELEKWVQSHGYRPGQAIMLWKRMYGNNIWA
HHTDELEGLNKDFKKMLSENADFMALAVKEIHAASDGTRKILFTLDDGMVIETVVIPCDR
GRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTSEVGSITNVVFM
GMGEPLHNIDNVIKAADIMVDDQGLHFSPRKVTVSTSGLVPQLRRYLQESNCAIAVSLNA
TNDEVRNWIMPINRKYKLDLLLETLREELSFKHKYKVLFEYVMLEGINDSNEDAKRLTEL
VKGIPCKINLISFNPHSGSFFKPTKEERMIEFRNMLAEAGCIVLLRPSRGDDQMAACGQL
GKPGTIQAPMLRVPQQFQMAVGSST
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaggaattggatgagcatgatggcgatgagcgcagttgcaaactcaacatttcttcct
ctcaaaaccattatccccttttctctcaccaaaacgtcgccgtttctcttttctctcacc
actccctctcgccgctatctttctgcttccgctcttccttctatatccactgaccatgag
ttcaacttctctgattcttctggagatggaaacggtgttgcagtttcaagaaaaagttcc
aaagttcttcttaaagggatgacttattctgaacttgaaaaatgggttcaatcacatgga
tacaggccagggcaggccattatgttatggaagcgtatgtatggaaacaacatttgggca
catcatactgatgagttggaaggtttgaacaaggatttcaagaagatgttgagcgaaaat
gcagatttcatggcacttgctgtgaaagaaattcacgcagcgtctgatggaactagaaag
attttattcacattagatgatggaatggtcatagaaacagttgtgataccttgtgataga
ggcaggactactgtgtgtgtttccagtcaagttggatgtgccatgaattgtcaattttgc
tatactggaagaatgggtcttaagagacatcttactgccgcagaaatagttgagcaggcc
gtttttgccagacggctattcacaagtgaagttggttccatcaccaatgttgtgtttatg
ggcatgggggaaccacttcataacattgataatgtcattaaagctgcagatattatggtg
gatgatcaagggcttcatttcagcccccgcaaggtcactgtttcaaccagtgggcttgtt
ccgcagctcagacgttaccttcaggaatccaactgtgctattgctgttagtttgaatgca
actaatgatgaggtgagaaactggatcatgcctataaatcgaaagtataaactggacttg
cttcttgagacgcttcgggaggagctttccttcaaacacaaatataaggttctatttgag
tatgtgatgcttgaaggaattaatgacagcaatgaagatgcaaagaggcttactgaactt
gtgaaggggatcccttgcaagatcaatctcatctcattcaatccacatagtggatccttc
ttcaaaccaactaaagaggaaaggatgattgaattccgaaatatgctagctgaggcagga
tgcatagtccttttaagaccgagtagaggcgatgatcaaatggccgcatgtggtcagtta
ggcaagcccggtaccattcaagctccgatgcttcgtgtccctcagcaattccaaatggca
gtgggaagttcaacgtga
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