Trifolium pratense (red clover): 123920356
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Entry
123920356 CDS
T08949
Name
(RefSeq) ubiquitin-like-specific protease 1D isoform X1
KO
K16287
ubiquitin-like-specific protease 1C/D [EC:
3.4.22.68
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123920356
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
123920356
Ubiquitin system [BR:
tpra04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
123920356
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
Cytomega_TRL10
eIF-3c_N
Motif
Other DBs
NCBI-GeneID:
123920356
NCBI-ProteinID:
XP_045828584
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Position
LG4:complement(56284792..56297817)
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AA seq
580 aa
AA seq
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MEEQQQQQRKGPIPLDWDTLLDETPAAEIFVKPSAMASDQEPQSFVPGLEDLKDCELHEQ
IRRKKNSLNTAGKKLPDRGAKLRAVIRCYEEEVHRRKVNPPPQKVEEKQATTSSDSVGVS
NKSRQENSPSRPQSEPSFASCLMKKLDDKNQTNCTAVDAFSNEKQYFKHCNNQTVRPNRE
RKRGKRHRSSSRQLPFKSPRKLSIRDTFSDDKRCQANSVLSLQTITRNLERRYSKDKGAS
QAILSDGSRSRKGQPIVVDDDDDDEEDDDSEDPRILERTENKVPEYLKEAKVYFPSRDDP
ECVEICYNDMECLAPEGYLTSTIMNFYMRYLQQRVSLTILDCCHFFNTYFYKKLTEAVSC
KESNRETIFAKFRRWWKGVNIFQKAYVLIPIHQDCHWSLIIICIPDKDESGPIILHLDSL
GLHSSESVFDNIKSYLIEEKNYLSRECASSDVPIADRIWKSLSRRIETRVIAVPQQKNEY
DCGLFVLYFIERFMEEAPERPKKKDLAKMFSKKWFEAEEASNLRAKIHKLLVAELHNSIK
PNGVTASSPSSDANATECVETAKDSSFEDGIMSCNSEIIE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaacaacaacaacaacggaaaggtcctattcctctcgactgggacacgctt
ctcgatgaaacgccggcggcggaaatcttcgtgaaaccctctgctatggcttccgatcag
gagcctcagtcctttgtccccggcctcgaagacctcaaagattgcgagcttcatgaacaa
attcggagaaagaagaatagtctcaataccgccggtaaaaaattgccggaccgaggtgcc
aaacttcgcgctgtcatcaggtgctatgaagaagaggttcatagacggaaagtcaaccct
cctccgcagaaagttgaagagaagcaggctactaccagctcagattcagttggtgtgtct
aataaatcgagacaagagaattcgccatctcgtccacagtcagaaccctcttttgcatct
tgccttatgaagaaattggatgataaaaatcagactaattgtacagctgttgatgcattt
agcaatgagaagcaatatttcaagcattgtaacaaccagacagtacgacccaacagagaa
cgtaaaagaggaaagagacatcgatcatcttcaagacaattgccatttaaaagccccagg
aaactttccatacgtgatacttttagtgatgataaaaggtgccaagccaattctgtctta
tccctacagactattacaaggaatctagaaagacgctactcaaaagataagggtgcttct
caggcaattctgtcagatggctcaaggtctaggaagggtcaacccattgttgttgatgac
gacgacgatgatgaggaagatgatgacagcgaagatcctcgtattctggagagaacagaa
aacaaagttcctgaatatttgaaagaagctaaggtctattttccatcaagagatgatccc
gagtgtgttgaaatttgttacaacgacatggaatgccttgctcctgaaggctacttaaca
tcaactatcatgaacttttacatgcgatatttgcagcagcgagtatctctgacaatatta
gactgctgccattttttcaacacatatttctacaagaaacttacagaagctgtatcctgc
aaggaaagtaacagagagacaatcttcgcaaagttcaggaggtggtggaagggtgttaat
atttttcaaaaggcatatgttttgattccaatacaccaggattgtcattggagcttgatc
attatatgtatcccagacaaagatgaatcaggaccaatcatacttcatttggattctttg
ggtcttcactcaagtgaatcagtttttgataatattaaaagctatttgatcgaagaaaag
aactatttgagtcgagagtgtgcttcttcagatgttccgattgcagacagaatatggaag
tctctttctcgcagaattgaaactcgagtcatagccgttccccaacagaagaatgagtat
gactgtggtctatttgtattatacttcattgagcgtttcatggaagaggcacccgaaaga
ccgaaaaagaaagatttagcaaaaatgtttagcaagaagtggttcgaagctgaagaggca
tccaatttgagagcaaaaatccacaagttgcttgtagcagaactacataattcaatcaag
cctaacggcgtaacagcatcttccccttcatctgatgccaatgcaaccgaatgcgttgag
actgccaaggactcttcgttcgaagatggcatcatgagttgcaattctgaaataattgaa
tga
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